Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1018 |
Symbol | |
ID | 4069842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1281067 |
End bp | 1283010 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637983025 |
Product | hypothetical protein |
Protein accession | YP_590095 |
Protein GI | 94968047 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0666768 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.893035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTATACG GGCAGAATGG CGCGAGCGAT GGATTCGATT TTTATCAGTT TCAAGTTGAC GGAACAGGCG CGACGCTTGC GAAACGCTAT AGCAACCTAT TCACGTATTT TGACTTCGGC TTCTACTACA ACCGGTCGAA CGGGCTGATG TATGGCGTGA ACGGAGAAGT CGTTGATCCG CAGACGGGAA CACTTGTCGG CAGGTTCAAT CTCGCTTCAT TCCAGTTCTG GCCTTTATGC CTGCCGGATC TAGAACAGGA TGTCGTATTT TTCCTTGGGC CAGCGTCATG GGAGAACTAT GGCCCACCGC ATTACATCCT GCAGGCGTTC GACACGAAGA CGTATCGTCA ATTAGGCACG CTTGAATTGC CGCAGGTTAC AGGCGACGCG AAGAACCTTG TTCGTTGGGG AAATGCCGGA CTCGCGTTCA ACACAGTGTC GGATAACGTC TGGGCGACCG ACAAACCTGG GGTGTACTTA ATTGACGGCG ATTTTGTAAA TCCTCACAAG ACGCCCGATG TGACGGCAGG AACGATTTTG AAGACCATCC CGCGACTGAC ATCTATCAGT CCGGTGAGCG CCCTGGTGGG AAGTGGGGCG CAGACGCTTA CGATCCGGGG CACGGGATTC CAGCCGTCGG CGACTGCGTA TTGGAACAAC AATGCGCAAA GCACTACGTA TATCAGCGAC ACGCAAGTAC AAGCGAGCAT TCCTCCGACG AATCTTTCGG CGGAGGGGAC GTCGAGCATC ACGGTAAACA ACAGCAGCAC TGCGGTCGCT TTTACTCCAC AGGCGTTCAG GGTAGTCGGT GCGGGGTCGA CCGCGATTCG GTTGAACCTG GGAAGCTACG ACATCGCGTG GGACAGCAAA TCCGCCAAGT TGTATGCGGC GGTGTGGAGC GCGGATGGAG CGTATCCGAA TGCGGTTGTG GCGGTCGATC CGAATACCGG GAATGTTGGG CCCTCGCGCA TAGGGATACC TGATCCAGAC CTGCTACGCG TGTCGAGCGA TGGAACGTAC GTCTACACGG CCCAGCGGCA TGCGAATACG ATGACGCGAC TCGATCTGCC CGGGCTCGAC AACCCGCTCA CATGGCCCCT CGGAGCGGAC GCTTTTTGGG GGCCGATGTT CGCGCTGGAT TTCGAGACTG CGCCGGGATC TCCAAACACA GTCGCCGTCA CTACAGGCGA CAGGGGAACC GAACCAGAAA GCCTGGGCGG AGTAGCGATC TACGATAACG ACATTCAGCG AACGAATAAG CTTTGTGCCG ATTGCACCAA CCAGTTTGGG GTGATCAATT TATTCGATGA CCTGGCATGG GGCTCCGATG ACACAACGCT TTACTCTTCG ATCATCGACG ATTGGGGCTA CCGCGACGAC TTTTACACCA TGGGCGTGAA CACCTCCGGG GTTGATCTGG TCAGCCGTTT CGAAAAATTC ACGAAGAGCT ACAACAGTTA CATCCACTAC GATTCAGCGT CGGGATTGAT CTATGTGGAC GATGGACGCA TCTTTGATCC GGTGACAGGT AATACCGTCG GCAATTTGGG AAGCTCCGGA TACGTCGTGC CTGACTCGAG CCTTGGCAAG ATCTTCGTGC TCGGGCAAAC GGCAGCACAG AGTGGAACGG CAGATTACAC AGTACTGTCA TTCGATAAAG GGAGCCTGAG CCAAGTCGGC TCGATAACCA TCAAGAACCT CGTTGGTGTG CCGGCGAAGA TAGTTCGGTG GGGGGCTTCG GGATTGGCGA TTGCCACAGT CAACAACGTG GCGCCGATTG GTGAGTTGTA CATCATCAAC GACGCGAGCT TCGTGAGTTC GGCTTCGCCC GCGGGGATTG GGGCCAGAAC AGTCGGCCCA GTGCGGTTGT CATGGACCGT ACCACAGCGG AGGGATCGAG CTTCCAAACC GGCATCTCGG AGCCAGGGAA TGCCCCTTCG CTAA
|
Protein sequence | MLYGQNGASD GFDFYQFQVD GTGATLAKRY SNLFTYFDFG FYYNRSNGLM YGVNGEVVDP QTGTLVGRFN LASFQFWPLC LPDLEQDVVF FLGPASWENY GPPHYILQAF DTKTYRQLGT LELPQVTGDA KNLVRWGNAG LAFNTVSDNV WATDKPGVYL IDGDFVNPHK TPDVTAGTIL KTIPRLTSIS PVSALVGSGA QTLTIRGTGF QPSATAYWNN NAQSTTYISD TQVQASIPPT NLSAEGTSSI TVNNSSTAVA FTPQAFRVVG AGSTAIRLNL GSYDIAWDSK SAKLYAAVWS ADGAYPNAVV AVDPNTGNVG PSRIGIPDPD LLRVSSDGTY VYTAQRHANT MTRLDLPGLD NPLTWPLGAD AFWGPMFALD FETAPGSPNT VAVTTGDRGT EPESLGGVAI YDNDIQRTNK LCADCTNQFG VINLFDDLAW GSDDTTLYSS IIDDWGYRDD FYTMGVNTSG VDLVSRFEKF TKSYNSYIHY DSASGLIYVD DGRIFDPVTG NTVGNLGSSG YVVPDSSLGK IFVLGQTAAQ SGTADYTVLS FDKGSLSQVG SITIKNLVGV PAKIVRWGAS GLAIATVNNV APIGELYIIN DASFVSSASP AGIGARTVGP VRLSWTVPQR RDRASKPASR SQGMPLR
|
| |