Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1017 |
Symbol | |
ID | 4069841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1279915 |
End bp | 1281051 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637983024 |
Product | cell surface receptor IPT/TIG |
Protein accession | YP_590094 |
Protein GI | 94968046 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0346067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA AATTCGCGGT TCTCTGGGTA TATCTAGCCT GTGCACTTCT ACTTGGCAGT TTGATCAGTT GCGGCGGCGG TGGTGGGGGC GGTAACTCAG GAGGAGGCCT GACTCCTGTA GTTCCATCGA TAACAGCGGT CTCGCCAACG GATGCACTGG TCGGGCGGTC TGACTTCCAT CTCGTGGTAA ACGGCGCGAA CTTCTCCTCG GCTGCCGTGG TGTTATGGAA CTCCAATCCG CTCGCGACCA CGTTTGTTAA CTCCGGAAAG ATCCAGGCAG ACGTTCCAGC AACGTCGCTG ACCGTTGGCG TGGCCGTAAA ACTGAGCGTA AAGAACGGCG ATACAGGGAA GGTGAGCGCC TCGTTCGAGT TCGATGTGTA CAACCCAGCG CCAACACTGA CTTCAATTTC GCCGACGAAC GCGAAGATGG GATTGCCGGT GACGATTACG GTCACAGGGT CCGCCTTTGT CAGCAACTCG CAGGTGCAGT GGAATGGGAC AGCGGTGGCG ACAACGTTCG TGAGTTCCAC GCAACTCACG GCGGACATTT CGGCAGCGCA ATTGGGAAGT GCCACTCCGG GATCGATCAA GGTATTTAAT CCCGGACCAC GGGGAGGGAC ATCGGAAGGG CAGACTCTGC TGGTGGTGAA CGCCGCAACG ACAATCACGA CGCTCGACGT GAGCGCGACC GCAATCGTGA ATGATCCGAC ACACGGGAAA CTGTATGCAA CGGGAGCATT CGATGGGTCA AATTATGGCG TATTGGCAAT TGACCCGCTG ACGGGCGCCG CAGGAACCTC GCAACCGGTA ACGGGGCCAA CCAGCCAGTT GGCGCTGTCT TCGGACGGCT CGTATTTATG GATAGGAGGA CGGGACAACA ACCTGATCCA AAGAGTGACG CTTCCGGGAT TTGCGCCGGA CGTTACGATT ACGATTCCGC CCAACCATTT AGGCGAAAAG ATGTTTCCGT TGTCGATGGC TGCGGCGCCT GTGGGTTCGC ACGCGCTGGC GGTTATGCGG AGCAATTATT CGACGGGAGC GGATTCGCTC GGTGTCATCT ATGACGATGC GACGCCGAGA GCAAACGCAA TCACGCCCGG AACCTACACG GTTGCCGGAG TGACCTGGCT GACGTAG
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Protein sequence | MKTKFAVLWV YLACALLLGS LISCGGGGGG GNSGGGLTPV VPSITAVSPT DALVGRSDFH LVVNGANFSS AAVVLWNSNP LATTFVNSGK IQADVPATSL TVGVAVKLSV KNGDTGKVSA SFEFDVYNPA PTLTSISPTN AKMGLPVTIT VTGSAFVSNS QVQWNGTAVA TTFVSSTQLT ADISAAQLGS ATPGSIKVFN PGPRGGTSEG QTLLVVNAAT TITTLDVSAT AIVNDPTHGK LYATGAFDGS NYGVLAIDPL TGAAGTSQPV TGPTSQLALS SDGSYLWIGG RDNNLIQRVT LPGFAPDVTI TIPPNHLGEK MFPLSMAAAP VGSHALAVMR SNYSTGADSL GVIYDDATPR ANAITPGTYT VAGVTWLT
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