Gene Acid345_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0987 
Symbol 
ID4068654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1252320 
End bp1252802 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content59% 
IMG OID637982994 
ProductMerR family transcriptional regulator 
Protein accessionYP_590064 
Protein GI94968016 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.758767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000750648 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGCAGC AATTATCCAA CAATCAATTG CGTTCCGGGG CGTTAGCGAA GGCAACTGGC 
GTGAGCCCAG ATACGGTGCG TCATTACGAG AAGATCGGCG TTCTGCCCAA GGCGTCGCGG
ACGCAATCGG GTTACCGCGT GTATCCCGAA GCGGCGATTG AACGCGTGCT TGTGGTGCGC
CGGGCTTTGC GCATCGGCTT TACCCTTCCG GAGCTTGCCG ACGTGTTGAA AGAGCGCGAT
TCTGGTGGGA CACCCTGCCG GCGAGTACGC GCCCTTGCTG AGCAAAAGCT TGCAGCGATC
GAGGCTGAAA TCACAGCACT AAGGCAAACG GCGGCGTATT TGCGTTCTGT CCTGTCGGAC
TGGGACAGCA GACTAAAAAA GGCCGGTCCC ACGCAACGCT CGCAGCTGCT GTACTCGCTG
AGCTTGGCGC CGGTGCCCGG CGGCCGCTCG AACAGATCCT TTCGCAACAG GAGTTCCTTA
TGA
 
Protein sequence
MVQQLSNNQL RSGALAKATG VSPDTVRHYE KIGVLPKASR TQSGYRVYPE AAIERVLVVR 
RALRIGFTLP ELADVLKERD SGGTPCRRVR ALAEQKLAAI EAEITALRQT AAYLRSVLSD
WDSRLKKAGP TQRSQLLYSL SLAPVPGGRS NRSFRNRSSL