| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0983 |
|---|
| Symbol | |
|---|
| ID | 4068650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 1245283 |
|---|
| End bp | 1248042 |
|---|
| Gene Length | 2760 bp |
|---|
| Protein Length | 919 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637982990 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_590060 |
|---|
| Protein GI | 94968012 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00288747 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000195095 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCTTC GTCGTCTCGT CGCTTTCCTT CTGCTTTCCA CAGCCTCGCT TTTCTCCCAA
ACCGCCCCGG TCTGCACTCT TCCGGCGATC CAGGTAAAGT CCGCGCCCGG CAACATCTTC
ACCGAGGCTC AGGAGAACCA GCTTGGTGAC GTCGTCGTTG ACCAGTCGCT CCCGTATATC
ACCATCATTC ACGACGAAAC ACTCGCCAGG CCCTTGCGCG AAATTGGTGC CAAGCTCATT
GCCCAGCTTC CCACGACGAT GACGTATCAC TTCGATGTCA TCGAGCTCGA TGAAGCCAAT
GCCTTCAGCT TGCCCGGCGG ACACATCTAT GTTTCGCGCA AGCTGATTGC GCTGACGCAG
ACGGAGGACG AACTCGCCGC CGTCCTCGCC CACGAACTCG GCCATGAGGT CACGCATCAG
GGAGCCGCGA CCTTCTCCCG CCTTTTTGCA ACCTTGCTTG GCGTTCACCA GGTCACTACC
GCCGACGACA TCCGGCACCG CTATAACCAA ATGCTCGACC TGCAAGCGTC CAAAAAGGTA
AAGCTCAGCA AGGAAGAAGA CGATCAGCTC GATGCCGACG CTGTCGCCAT CCAAGCCCTC
GCCCGTGCCG GTTATAGCGC CTCGGCTTTT GCGTCCATGT TTGACCGCGT CGCCGAAACC
CATGGCGGGA AGAGCAGCTT CTTCGCGGAT CTCTTCGGCA TGACCAAGCC CAACACCGCG
CGCTTCCGCA AAATCCAGAA GACGATCGCC ACCCTGCCGA CAGAATGTTC AACCCAGCGC
GCGACCGGCG ACTCCTTCGC GAAATGGCGT ACCAGCATCA TCGAGTACGA TCCCACCGCA
GCGGCCGAGG CCCATGCTCC GGGTTTGCTC TGGCAAAAGA AGCTCACGCC CGCATTGCGT
CCCGGTGTGA AAGAGATCCA GTACAGTAGC GATGGCCGTT ACCTCCTCAT CCAGGACAGC
GGCGCCATTC ACGTCGCAAC CCGAGATCCG CTGAAAGAAG TTTTCCAGAT TCCTGCCCAG
CGCGCCTATC CCGCCAAGTT CTCTCTTGAT GGCCAGCGCA TCAGCTTTTA CATGGGCAAC
GGCGAGCCCC GCATCGAGGT GTGGAGCGTC GCCGACCAGA AGCGCGTAGA GGTGCATGAA
CTCCACGTGA AGCAGCGCGA GTGTCCGCAG TCGGAACTCT CGGCCGATGG CAAGGTTTTC
GCATGTATCC AGGCGCGCGA AGTCAGCGAC GGCGTTTATT TCGACCTCGT TCTCTACGAC
GTTTCAAACG GCGCGGAGCT GCTGCGCTTC CCGAAGATCC GCGACGCCAC CGGCTGGAAC
GCTTACGTCC TGCTGCGTCA GTACACAGCG GTCGTCAATC GCCACGGTTC CTTCGAGCTG
GTTTCCATGC ATTTCTCGCC AGATGGTCAC TGGCTGGTCG CGGCGTTCCT GAACCGCATG
GTGGCCTTCG ATCTGACCCA GAGAACGAAA GTTGAGTTCC CGCCGCAGAT CGCAAAACTG
CTCGGTAATA GCTTCGTCTT TCTATCCCCG GACCGTGTGT TGGTGTCGAA GTTCGTCGGC
GCATCCAGTG CCGATGTCCG CAGCTTCCCC GGCGGCGACC TCATCAAGCC CGACATCCTT
ATTGGTGCTG GCTGGGTCCG TCCCACCGAG GACCCCAACC ATGTCCTCGT TGGTCCGCTC
GACGACTACC CGCTCGGCAT CGTTGACATC AACACCAACA AGGTCGCGCT TCGTCTCAAA
GGCCGCAGCG CCAACGTCTG GAAGGACGAG TTCGCGATGG AAAGGACGGG CGGCGACCTC
TCGGTCAACA ACCTCCCCGA TGCCAAAGAG AAAGCGCTCC TCCATCTTTC CGACAGCCAG
CTCGGCAGCG TCGATCTCGG CGTGATCTCC GGCGACCTTT CCTGGATTGC CTACACCGAA
GGCGCCCGCG GCGGCGTGTG GAACCTGGCA ACCGGCGAGC GTGCTTACCA TCTGCGCGAT
TTCAACGGCG CGTATTTCGC AGGCGATACC GTCCACGCGG ACATGCCGAA ATTCGAGAAG
AGCCCGCGCG TCATCGCCCA CATGAAGCTG CCCGGCTCCG CCGTCACTAC CAACGAGTTA
CCAGGCGACG ATCACTTCCT TCAGTACGGG CCGATCGTGC TCGCATTCCG CTCCGGTAAA
ATCGGTCGCC ACCCGAAGGA CGAATGGTAC GACTCGGAAG TCACGCAAGT CCGTGGCCTC
GACGTCGCCA CCCTCAAAGA GCTCTGGACC GAGCCCATCG CGAAACGTGC CGACGCCTTC
CACGTGCACT CCACCGGCGA TACCTTCGTC ATTGAACGCG ACGAGAAAGA TGTCGTGAAC
CTCGAGTTCC AGCAGCTATC CACCGGAAAG CCGCTCGCGA AGCTCGCCAT TAAAACCAAC
AAACATTCCT TCAATGTGAT CGACGCCGTC ATCGCCGGTG ACTACCTCAT CGTGGCGGAC
GATCAGTCTC GTTCGACCAT TTACAAAACC AGTGGCGAAG AGGTGGCGCG CGTCTTCGGC
GGATACATCA TGCCCTCGGC GAAAGCCGGC GTCCTCGCCG TGCAATCCGA AGAGCAGGGC
GTCTTCCTCT ACGAACTGGC AACGGGCAAA AAGATCGACA CCCTCCAGCT CGGCCGCCCC
ATCGTGTATT ACAACTTCGA CTCGACCGGA GAAAAACTCT TCGTCCTCAC CTCCGACCAG
GTGGCCTACG CCTTCGACGT CGAGAAGCTG AAAACCAGCG CGACCACCGG CGCGAACTGA
|
|---|
| Protein sequence | MGLRRLVAFL LLSTASLFSQ TAPVCTLPAI QVKSAPGNIF TEAQENQLGD VVVDQSLPYI
TIIHDETLAR PLREIGAKLI AQLPTTMTYH FDVIELDEAN AFSLPGGHIY VSRKLIALTQ
TEDELAAVLA HELGHEVTHQ GAATFSRLFA TLLGVHQVTT ADDIRHRYNQ MLDLQASKKV
KLSKEEDDQL DADAVAIQAL ARAGYSASAF ASMFDRVAET HGGKSSFFAD LFGMTKPNTA
RFRKIQKTIA TLPTECSTQR ATGDSFAKWR TSIIEYDPTA AAEAHAPGLL WQKKLTPALR
PGVKEIQYSS DGRYLLIQDS GAIHVATRDP LKEVFQIPAQ RAYPAKFSLD GQRISFYMGN
GEPRIEVWSV ADQKRVEVHE LHVKQRECPQ SELSADGKVF ACIQAREVSD GVYFDLVLYD
VSNGAELLRF PKIRDATGWN AYVLLRQYTA VVNRHGSFEL VSMHFSPDGH WLVAAFLNRM
VAFDLTQRTK VEFPPQIAKL LGNSFVFLSP DRVLVSKFVG ASSADVRSFP GGDLIKPDIL
IGAGWVRPTE DPNHVLVGPL DDYPLGIVDI NTNKVALRLK GRSANVWKDE FAMERTGGDL
SVNNLPDAKE KALLHLSDSQ LGSVDLGVIS GDLSWIAYTE GARGGVWNLA TGERAYHLRD
FNGAYFAGDT VHADMPKFEK SPRVIAHMKL PGSAVTTNEL PGDDHFLQYG PIVLAFRSGK
IGRHPKDEWY DSEVTQVRGL DVATLKELWT EPIAKRADAF HVHSTGDTFV IERDEKDVVN
LEFQQLSTGK PLAKLAIKTN KHSFNVIDAV IAGDYLIVAD DQSRSTIYKT SGEEVARVFG
GYIMPSAKAG VLAVQSEEQG VFLYELATGK KIDTLQLGRP IVYYNFDSTG EKLFVLTSDQ
VAYAFDVEKL KTSATTGAN
|
|---|
| |