Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0981 |
Symbol | |
ID | 4068648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1241913 |
End bp | 1242740 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637982988 |
Product | hypothetical protein |
Protein accession | YP_590058 |
Protein GI | 94968010 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00335023 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000157942 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGTCGCGC CGTTCTTGGC CCGGCGCATC TGGCAACGAG AGACGTTTCC GGTGGAACTC AGTCATTGCG CGAATTGCGA TTTCGAGTTC TACAACCCGC GGCTCGAACT GACAGAAGAG ATGAAGCTCT ACCACGACTA TCGCGAGAGT GAGTATCAGA AATCGCGGCA GGAAACAGAA CCGTGGTATA GCGAGGCGTT CAACAAAGGC CTCGCCGATG AGAAGCGCTG GACTGGGCGA ACCGGAGCGT TAGGGCCGGT GGTGAAGCAG GCGCTGACGG GGCGGAAGGT CGCGAGTGTC CTGGATTTTG GCGGGGATCG CGGAGAACTG GTGGACAAGC TGTTTCCGGA TGCGGAGCGG TTTGTGTACG ACATCTCCGG CGTGGAGCCG GTGGCGGGCG TGACCGCGCT GCGATCGGAA GAAGAGTGCA AGCAGCGTGG GTTCGACGTG ATCGTAACCA GCAACTTGCT GGAGCATGTT GGGTTTCCGC TGGAACTGAT GGCGCGGATC AACGCCATCG CTGCGCCGAA CACGCTGGTG CTTCACGATG TGCCGCTGGA GAGTTCGCTG AGCGCGCCGA TGGTGGCGCG TCGGGTGGTG CAGTTTGGTG TGCTGGGCGT GACGCGGCCG AAGGTGGCGA AGTCGCTGAT GCATGGCGGA TGGCTGCGCG TAATGCACGA GCACGTGAAC TACTTCTCGC TGAAGGCGCT GAACGAGATG ATGCGTCGCG CGGGATGGAA TGTGCTGTCG AGCGGGATTT ACAGAATTGG TGCGGCGCCG CTGGGACAGC CGATGTTATG GAACCTGTCC GAACGGGCAG CGGTATAA
|
Protein sequence | MVAPFLARRI WQRETFPVEL SHCANCDFEF YNPRLELTEE MKLYHDYRES EYQKSRQETE PWYSEAFNKG LADEKRWTGR TGALGPVVKQ ALTGRKVASV LDFGGDRGEL VDKLFPDAER FVYDISGVEP VAGVTALRSE EECKQRGFDV IVTSNLLEHV GFPLELMARI NAIAAPNTLV LHDVPLESSL SAPMVARRVV QFGVLGVTRP KVAKSLMHGG WLRVMHEHVN YFSLKALNEM MRRAGWNVLS SGIYRIGAAP LGQPMLWNLS ERAAV
|
| |