Gene Acid345_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0953 
Symbol 
ID4070835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1211989 
End bp1213440 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content62% 
IMG OID637982960 
Productthiamine pyrophosphate enzyme-like TPP-binding 
Protein accessionYP_590030 
Protein GI94967982 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0790519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGGT ACGACATCAT CAAGCACAAA TCTCCGGCCT TCTACGACAG CTTTGAGCGG 
AAGGACGAAC TGCAGAATCA AACCCACTAT TGCCCGGGCT GCGGCCACGG CGTCGGCCAC
AAGCTAATCG CCGAGGCCCT CACCGATCTC GGCCTCCAGG ACCGCACGGT GCTTGTGAGC
CCGGTCGGCT GCTCGGTGTT TGCGTATTAC TACTTCGACG TGGGCAACGT GCAAGTCGCC
CACGGACGCG CCCCGGCCGC GGCCACCGCG CTGCGCCGCT CCAACCCCGA GAGCATTGTC
ATCAGCTACC AGGGCGACGG CGATCTCGCG GCCATCGGCA CGGCGGAGAT CATTCACGCC
GCCAATCGCG GTGAGAACAT CACCGTGATC TTCATGAACA ACGCGATCTA CGGCATGACC
GGCGGCCAGA TGGCGCCGAC CACGCTCGTG AACCAGACCA GCACCACGTC ACCCTACGGA
CGCAATCCGC AGAACGAGGG CTTCCCGCTG CACATGTGCG AGTTGCTCTC GAGCCTGGAA
GCGCCGGTGT ACATCGAGCG CGTTTCGCTC GGTGACCCGA AGAACATCAT GAAGGCGCAG
CGCGCGGTAA AGAAGGCACT CACTCTGCAG AGCCAGAAGG CCGGCTTCAC CTTCATTGAA
ATCCTCTCGC CCTGTCCGAC GATCTGGAAG AAAGATCCGA TCGAGGCCCG CAAGTGGGTC
AGCGAAGTTC TGATGAAGAC TTTTCCAGTC GGCGTCTATC GCGAGAAGAA ACTCGAACTG
CCGGAATGCA AACACGCGCC GCAGAAGACG GTCGCGGAAT GCATCGGCGC TACGCAAGGC
GTAGAGAAGA CCACCGGTCA TCGCCACCAC ACTCGCGACA TCAGCATTAA GATCGCGGGC
TTCGGCGGAC AGGGCGTTCT TCTCCTCGGC CAGATCATCG CCGAGATGGG TATGCGCGAG
AGCATGGAAG TAAGCTGGCT TCCCGCGTAT GGTCCGGAAA TGCGCAGCGG CAGCGCCAAC
TGTAGCGTTA CCCTGGCACA CGACCGCATC GGAACGCCGC TCATCACGCG GCCGGAAGTG
TTGGTCGCGA TGAACGAGCC CTCGCTACGG AAGTTCGCCG ATACGGTTGC TCCCGGCGGC
GTCATCCTCT ACAACCGCGA TCGTCTGCCG GAAGATTTCA GCATCTCGCA TGCGCGTGTG
TTGTGTGTAC CAGCTTCCGC GATGGCCGAC ACACTCGGCT CCGCGAAGGT CGCCAACGTG
GTCATGCTCG GCGCGCTTCT CGAAGAGACC GAATGCCTGC CCTCCGAGAG CGCGATCGCC
GTACTCGAAT CCACAGTCAA GAACCCAAAG ATCCTCGAAC TCGACAAGCA GGCCATCAAG
GCCGGCCGCG ATTTCGTTGA TAACCAGGTG CGCGTCGGCG CCGTCCCCGG GCCCGACGGG
TACGCATACT AG
 
Protein sequence
MEGYDIIKHK SPAFYDSFER KDELQNQTHY CPGCGHGVGH KLIAEALTDL GLQDRTVLVS 
PVGCSVFAYY YFDVGNVQVA HGRAPAAATA LRRSNPESIV ISYQGDGDLA AIGTAEIIHA
ANRGENITVI FMNNAIYGMT GGQMAPTTLV NQTSTTSPYG RNPQNEGFPL HMCELLSSLE
APVYIERVSL GDPKNIMKAQ RAVKKALTLQ SQKAGFTFIE ILSPCPTIWK KDPIEARKWV
SEVLMKTFPV GVYREKKLEL PECKHAPQKT VAECIGATQG VEKTTGHRHH TRDISIKIAG
FGGQGVLLLG QIIAEMGMRE SMEVSWLPAY GPEMRSGSAN CSVTLAHDRI GTPLITRPEV
LVAMNEPSLR KFADTVAPGG VILYNRDRLP EDFSISHARV LCVPASAMAD TLGSAKVANV
VMLGALLEET ECLPSESAIA VLESTVKNPK ILELDKQAIK AGRDFVDNQV RVGAVPGPDG
YAY