| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0930 |
|---|
| Symbol | |
|---|
| ID | 4070582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 1179071 |
|---|
| End bp | 1180777 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637982937 |
|---|
| Product | sporulation protein and related proteins |
|---|
| Protein accession | YP_590007 |
|---|
| Protein GI | 94967959 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG2385] Sporulation protein and related proteins |
|---|
| TIGRFAM ID | [TIGR02669] SpoIID/LytB domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000915589 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGC TGCGCTGGCT GTGCCTCTTC TTCGCGACGA CGGCGATGGC GCAGCAGCCG
CCGTTTCGCG TGCGGCTATT GTCGCTATAT CACTTGCAAG AGGTAACGAT CGCGCCTGAT
GGACCGTCGA CTTTGCGATT AGATGGGAAA CAAGAAAAAC TCATGAGCAC GATCGCGGTG
CGTGTAGACG GAGGCTCGAT ACGCATCGGG GACCGTGCTG CCATGCGCGT CGCGATTAAT
GGGCCAGTAA GGATCAGCGG CGGGACGATT CGCCCGATGA GCGTGCATGT GCCGTTGGAG
ATCTCGGCAG TTCGCGGAGA GTTGCGCGTT ATCGCCGTTT ATCCGACGGA AGAGTACGTT
GCGGCGGTGC TGCAGGGAGA GACAGCGGGA GATATGCCGC CCGAAGCATT GAAGGCATTG
GCGGTCGCGA TCCGCTCGTA TGCGACGCGG TTTCGCGAAC GACATAAGGA AGAGCATTTC
GATTTCTGCG ACAGCACTCA TTGCCAGTAT CTCCGGACAG ACGTCTCGCC TGCGGTGCAG
CAGGCGGTTA CGCAGACCGC GAACGAACTG CTGTGGGACC GCGGGTCACC GCTGGCGGCT
TATTACCACA AGGATTGCGG AGGACGGACC GAAGACGTCG CGTCGGTGTG GCCGGATCAA
CGGTCGGCTG CGCTGGTCGC GCATGAGGAT CCCTACTGTA AGCGAGTTTC GAAGGATTGG
AGTGCGGAGT TGACGCGCGA AGAGATAGCG AAGGCGCTCG AGGCGGCGAA GTTGCAGGTT
CCGGTGAAGT GGGACCGGAT TGTGGTCACA TCGCATACGG CGTCGGGGCG TGTGCAAAGG
CTGGAATTCC GCGTGGGAGA GAGCCAGCAA CGAGCCACGA TGTCGGCATC GAGTTTTCGG
TTTGCACTCG GACATGCGCT GGGCTGGAAC ACGCTGAAGA GCGATTGGTA CGAGGTGAGT
GGGAACGGCG ATCGATTTGT TTTCCGAGGC CGCGGGGTTG GACATGGCGT GGGACTCTGC
CAGACGGGCG CGGCGGAGAT GGCACGCTCC GGCAAAAATT ATCGCGAGAT TTTGGCGTTC
TATTATCCGG GCACGGCGAA TGCGGCCTCA GCGCAAGGGA TTCCGTGGAT CAGTCGTGCC
GGAAAGGTCG ACGTGCGCGC AGTAAATATT CCCGATGCGG AGCGTGTGCT TCCAGCTTCG
GAGGAGGCGC TGGCCTGGGC CAGCCAGAAA TCGGGATTGG TGCTGAGCGG GCGTGCGGCA
GTTGACGTGT ATCCGACGGT AGAGATGTTC CGCAACGCAA CTGGCGAGCC CGGATGGGTG
GCGGCGAGCA CGCGCGGAGA TCACGTCCGC ATCCAGCCGC CGAGCGTATT GGGATCAAGG
CTCCGTTCCC TGCTGCGGCA CGAGTTCCTG CATTTGCTGG TGGAATCCAA TGCGAAACCG
GGAACACCGT TGTGGTTTCG CGAGGGATTG GTACTTTATC TCGGCGATGA ATCGCGAAGT
TCCGTTGTAC ACCCGATGAC GACGGATGAG ATGAGTCACG CGATTGAGAC GCGTAGCGAC
GAAGCGAGTG TGCGGCGAGC CTATGAAGCG GCGACCACGA GGGTCGCCGC GTTTGCCAAG
CAGTACGGAG TGCGAGAACT ACTTCGCTGG CTCCGGAGCG GAATTCCCAA CGATGTCGCT
GTTAGTTCGG ACAAAGTAGC CCAGTAA
|
|---|
| Protein sequence | MKVLRWLCLF FATTAMAQQP PFRVRLLSLY HLQEVTIAPD GPSTLRLDGK QEKLMSTIAV
RVDGGSIRIG DRAAMRVAIN GPVRISGGTI RPMSVHVPLE ISAVRGELRV IAVYPTEEYV
AAVLQGETAG DMPPEALKAL AVAIRSYATR FRERHKEEHF DFCDSTHCQY LRTDVSPAVQ
QAVTQTANEL LWDRGSPLAA YYHKDCGGRT EDVASVWPDQ RSAALVAHED PYCKRVSKDW
SAELTREEIA KALEAAKLQV PVKWDRIVVT SHTASGRVQR LEFRVGESQQ RATMSASSFR
FALGHALGWN TLKSDWYEVS GNGDRFVFRG RGVGHGVGLC QTGAAEMARS GKNYREILAF
YYPGTANAAS AQGIPWISRA GKVDVRAVNI PDAERVLPAS EEALAWASQK SGLVLSGRAA
VDVYPTVEMF RNATGEPGWV AASTRGDHVR IQPPSVLGSR LRSLLRHEFL HLLVESNAKP
GTPLWFREGL VLYLGDESRS SVVHPMTTDE MSHAIETRSD EASVRRAYEA ATTRVAAFAK
QYGVRELLRW LRSGIPNDVA VSSDKVAQ
|
|---|
| |