Gene Acid345_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0925 
Symbol 
ID4070577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1169911 
End bp1170255 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content57% 
IMG OID637982932 
Producthydrogenase expression/synthesis, HypA 
Protein accessionYP_590002 
Protein GI94967954 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000996946 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACGAAT TGTCGATCGC GATGAGCATT ATTGATGTCG CTCAGGAAGA AGCGGCGCAG 
CGGGGAGTGC AAGTAACGGC CGTGCACATC AAAGTCGGTG CGTTGTCGGG TGTGGTTGCG
GATGCGTTAC GCGGATCCTT TGAGATGGCG TGTTGCGATA CACCGTTGGC AGGATCGAAG
CTGGTGATTG AGGAAGTGCC CGCAATGATT CAGTGTCCGA AGTGCGGGGT GCCGAAGCCG
GTGAGTTCGA TTCAATGGTT CTGCTGCGCG GAGTGTGGAT CGCCGGGCCA TGAGATTACA
CAGGGGAAAG AACTGCAGGT GACTGCGTTG GAGGTGGCGG AATGA
 
Protein sequence
MHELSIAMSI IDVAQEEAAQ RGVQVTAVHI KVGALSGVVA DALRGSFEMA CCDTPLAGSK 
LVIEEVPAMI QCPKCGVPKP VSSIQWFCCA ECGSPGHEIT QGKELQVTAL EVAE