Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0925 |
Symbol | |
ID | 4070577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1169911 |
End bp | 1170255 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637982932 |
Product | hydrogenase expression/synthesis, HypA |
Protein accession | YP_590002 |
Protein GI | 94967954 |
COG category | [R] General function prediction only |
COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000996946 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACGAAT TGTCGATCGC GATGAGCATT ATTGATGTCG CTCAGGAAGA AGCGGCGCAG CGGGGAGTGC AAGTAACGGC CGTGCACATC AAAGTCGGTG CGTTGTCGGG TGTGGTTGCG GATGCGTTAC GCGGATCCTT TGAGATGGCG TGTTGCGATA CACCGTTGGC AGGATCGAAG CTGGTGATTG AGGAAGTGCC CGCAATGATT CAGTGTCCGA AGTGCGGGGT GCCGAAGCCG GTGAGTTCGA TTCAATGGTT CTGCTGCGCG GAGTGTGGAT CGCCGGGCCA TGAGATTACA CAGGGGAAAG AACTGCAGGT GACTGCGTTG GAGGTGGCGG AATGA
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Protein sequence | MHELSIAMSI IDVAQEEAAQ RGVQVTAVHI KVGALSGVVA DALRGSFEMA CCDTPLAGSK LVIEEVPAMI QCPKCGVPKP VSSIQWFCCA ECGSPGHEIT QGKELQVTAL EVAE
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