| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0917 |
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| Symbol | |
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| ID | 4070569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1155559 |
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| End bp | 1157259 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637982924 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_589994 |
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| Protein GI | 94967946 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00563549 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGCTTGG CAACTCCCGC CGTATTCGCC CAACAGTCGG CGGCTGATTT TTATAAGCGG
GGAGTTCAGG CCTACGGGCG GGGAGACGAC GCATCCGCGC TCTCGTCTTT TCAACAGGCA
TCGAAACTCG ATCCCAATAA TCCCGAGTAT CAGAATGCCG TAGGCCAGGC GCTGTTCAAG
CAGGGAAGAC CAGCCGAAGC AATTCCGTAT TTCCGTCATG CCCTCAAACT CCGCCCCGAT
CTCGCAGTCA TTCATGCATA CCTGGGTCAA GCTCTTCTCG CCGATCACCA GGCTGATGCC
GCCATTTCCG AATACCGTAT CGCTGTCAAA ATGGCTCCCA ACGAAGTCGA GGCCAATCGT
GGATTGGGTC GCTCGCTCAG CACCAAAGGG GACCTCGACG GCGCCATCGC CGTCTATCGT
TCCGCACTGG AGACCAATTC GCAAAGCGCG CCACTTCATG ACGATCTCGG CTCGTTGCTG
GCCCAGAAAA AAGACTTCGT TGCCGCGCAA CAGCAATTCG AACAAGCCTT AAAACTCGAC
CGCCAGTACG AGCCCGCACA TTTTCACCTT GGCGTCGCGC TACTTTCACA AGACAAAGAT
CCTGAGGCAA TGCTTTCTTT ACAGGAAGCG GTGCGTCTCG CGCCGAACGA TGTTGCCGCC
CACTTCTTTC TCGGTCGCGT TCTCGAGACA CTCGGCGACA ACGCGAATGC TCTACAGAAC
TACAAAGACG CTGCCCAACG CTCTTCCGAA TTTCCCGGCC TCCAGGAGAG ACTTGGACTC
ACAGCGCAAC GAGTAGGCGA AATGCCGACC GCGATCTCCG CTTTCCAGAA AGCCATCGCG
CAATCCCCGC AGAACCCCGA TCTTCATAAC GACCTTGGCC TGGCATTCAT GCAGGCTGGA
GATGGCGAGG GAGCTATTCG GGAATTTAAC CAGGCCCTCA ACCTGAAGCC GGAGGATGTC
GGCTATCTCG GAAATCTCGG GGCCGCCTAC CTTCAGCTTT CCGAGTTCGA CAACGCCGTT
GATAACTTCC GCAAAGCTCT CCAGATCGCG CCGGCCAACG CATCACTGCA CCATGATCTC
GCGTTGACAT TGAAGTTGAA GGACGATCTC GCCGGAGCTG CAGCGGAGCT TCGCGAGGCC
ATCCGGCTCG ATCCTAAACT CTACGACGCA CATTACACGC TGGGAGTCAC CCTTTGGCAG
CAAGGCGAGT TTCCCGCCGC CGTTGAAGAA CTCGAAGCCG CCCTCGCCCA GAAGCCCGAC
TATGCTGAGG CTTATTACAC CCTCGGCACC GTTTACAAGC AGATGAATAA ACCGCGTGAA
TCCGCCGAAG CACTTCGCTC TGCATTGAAA ATTCAGCCCG ACTTCGCCGG CGCTCACACG
ACTCTAGCCG CAGTCCTCCG TCAATTGGGC GACACCGCTG GTGCCTCCGA AGAAGCACGT
ATCGGCGCGG AACTTGCAAA GAAGAAAACC GGCATGCAGG CCGCGGTGTT CGCAACCAAC
TCTGGAATTC GTCTCCTAAA TGCAGGCGAT CTGGATGGGG CTGTTTCCCA ATTCCGACGG
GCTACCGAGT CGGCACCCGA CTACGCCATG GGGCACTTTC AACTCGCAAC TGCACTCTCC
CGCCAAGGCA AACGCGACGA GGCCGATGCC GAGTTCTCCA AGGCTGCAAC CCTTGATCCA
CACCTGAAAA CCCAGAAGTA G
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| Protein sequence | MCLATPAVFA QQSAADFYKR GVQAYGRGDD ASALSSFQQA SKLDPNNPEY QNAVGQALFK
QGRPAEAIPY FRHALKLRPD LAVIHAYLGQ ALLADHQADA AISEYRIAVK MAPNEVEANR
GLGRSLSTKG DLDGAIAVYR SALETNSQSA PLHDDLGSLL AQKKDFVAAQ QQFEQALKLD
RQYEPAHFHL GVALLSQDKD PEAMLSLQEA VRLAPNDVAA HFFLGRVLET LGDNANALQN
YKDAAQRSSE FPGLQERLGL TAQRVGEMPT AISAFQKAIA QSPQNPDLHN DLGLAFMQAG
DGEGAIREFN QALNLKPEDV GYLGNLGAAY LQLSEFDNAV DNFRKALQIA PANASLHHDL
ALTLKLKDDL AGAAAELREA IRLDPKLYDA HYTLGVTLWQ QGEFPAAVEE LEAALAQKPD
YAEAYYTLGT VYKQMNKPRE SAEALRSALK IQPDFAGAHT TLAAVLRQLG DTAGASEEAR
IGAELAKKKT GMQAAVFATN SGIRLLNAGD LDGAVSQFRR ATESAPDYAM GHFQLATALS
RQGKRDEADA EFSKAATLDP HLKTQK
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