Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0902 |
Symbol | |
ID | 4069113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1129639 |
End bp | 1131156 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637982909 |
Product | Alpha-L-fucosidase |
Protein accession | YP_589979 |
Protein GI | 94967931 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3669] Alpha-L-fucosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.13799 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGC CGCTGGTGGT GCTCGCATTT CTTGCTATTG GAACTCTGTT AACCGAAGCG CAGGAGCAAC CTGCAAATGT TCAACGCGAA CTGAAGTCCA TTGACCACAC TGTCGCTGCA GGGCCGTTCC GCGATGACTG GAATTCCCTG AAACAAATGA AAGTTCCCGA TTGGTTTCGC GACGCAAAAT TCGGGATCTT CATTCACTGG GGTGCGTACT CCGTGCCGGC GTGGGGCAAC GAGTGGTATC CGCGAAACAT GTATCAGAAG AAAGAGCCGG AGTTCGCTCA CCACATCGAG ATTTACGGGC CGCAGAACAA ATTTGGCTAC AAAGATTTTC TGCCACAATT CACGGGAGAC AAGTTCGACG CCGATCAGTG GGCCGACCTG TTTCGTCGCG CAGGAGCGAA GTACGTGATC GAAGTCGCCG AGCATCATGA CGGCTTCGCG ATGTACGACA CTCAATTCAG CGAGTGGAAA GCTACAAAGA TGGGACCGCA TCGTGACGTG ATCGCCGAAC TTGGCCCGGC GGTTCGCAAG GCTGGATTGC ATTTCGGAAT CTCGTACCAC CGCGCGGAGC ACTGGTGGTT TTTCGATGGC GGCAGAACGT TCGACTCCGA TGTAAACGAC CCGAAGTATG CGAGTTTTTA CGGCCCGGCC CAGCCTCAAC GCTTGCCTGG TGCAGATCGT GACAATCAGC CAGATGCCGC GTTCCTTTCC GACTGGCTTG CCCGCAGTGG AGAAATTGTC GAGAAGTATC ACCCGGACCT CTGGTATTAC GACTGGTGGG TCGGCCAGCC GGCGTTCGAA CCCTATCTGC GGAAATTCGC AGCGTTCTAT TACGACGAAG CAGCCAAGGC GCAGCAGCCG GTTGTCATGT ACTACAAGGA AAAAGCAATG CCGCAAGGCA CTGCGGTTCA CGACGTCGAG CGTGGCAAAC TCGCGGCCAT CCAACCCGAA CCTTGGCAAA CTGACACTTC GATCAGCTAC AAATCATGGG GCTACCTGAA AGATGACTCG CTGCGAACGC CAAAATCCAT CGTGCAAGAC TTGGTTGATA TCGTTAGCAA GAATGGGTGC TTGCTATTAA ATGTCGGTCC GAAGCCAGAT GGAACGATTT CAGAGGACGA GCAGAAGATC TTGCTCGCAG TCGGAGAGTG GCTCTCTCTG AACGGAGAGG CTATTTACGG CTCTCGTCCG TGGACGACTT TCGGCGAAGG TCCGACCCAG GTGAAAGAAG GCAGCTTAAA CGAAGGCGAG CAGAAGCCGT TCACTTCGGA CGATATACGC TTTATTCGGA ACCATGAGGC GCTGTATGCA ATTTCGATGG ATTGGCCGAA AGATGGAAGC ATACGGATAC GGTCACTCGA CAAGGAATTG AAAGTGAGGA GCGTGTTGCT GGTGGGATCG GCAGGCAAGG TATCTTTCAA ACAAGATGCC GAGGGGCTTT GGGTCGAACT GCCTAAGGAT ATAAGTGATG AACTGCTTCC GGTTTTGAAA ATCGAATTTC GCCAATAG
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Protein sequence | MNKPLVVLAF LAIGTLLTEA QEQPANVQRE LKSIDHTVAA GPFRDDWNSL KQMKVPDWFR DAKFGIFIHW GAYSVPAWGN EWYPRNMYQK KEPEFAHHIE IYGPQNKFGY KDFLPQFTGD KFDADQWADL FRRAGAKYVI EVAEHHDGFA MYDTQFSEWK ATKMGPHRDV IAELGPAVRK AGLHFGISYH RAEHWWFFDG GRTFDSDVND PKYASFYGPA QPQRLPGADR DNQPDAAFLS DWLARSGEIV EKYHPDLWYY DWWVGQPAFE PYLRKFAAFY YDEAAKAQQP VVMYYKEKAM PQGTAVHDVE RGKLAAIQPE PWQTDTSISY KSWGYLKDDS LRTPKSIVQD LVDIVSKNGC LLLNVGPKPD GTISEDEQKI LLAVGEWLSL NGEAIYGSRP WTTFGEGPTQ VKEGSLNEGE QKPFTSDDIR FIRNHEALYA ISMDWPKDGS IRIRSLDKEL KVRSVLLVGS AGKVSFKQDA EGLWVELPKD ISDELLPVLK IEFRQ
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