| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0888 |
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| Symbol | |
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| ID | 4069138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1105492 |
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| End bp | 1108314 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637982895 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_589965 |
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| Protein GI | 94967917 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.434689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCGCT TCGTTTTTAA CACGATGCTT TGGAGCGGAT TCACTTGGGT CCTGTTGGCG
GCGATGGGGG TTGCTCAGCA ACTGTCGACG CCGCTGCCTG CCCAAAGCGA CATAACAGAT
GCGCGTTCTT CCGAGAGCAT GTCACTTCCA GCGTCCGCAC TCATCAATCT TCTCAAACAA
CGTCCGGACT TGGTGATCGA GATTAAACGC GCCGCAGCGA CATACCTTCA AGCGAAAGGA
ATGGACGTTT CGGAAGATGT AATCACCGAC GACATGCTGT TCGAACGCAT CAATACTGAT
CCGGATTTCC GCAAGTCGCT GACGTCGTGG TTGTGGACGC GCGGATACAT CAATCAATCG
GATATCGAGA ATGCGGCGTT GAGCCAATCG AATTCTGGTG CCGAAGAAAG CGGGAGCACG
CAACCCTTCG ACTCACAGCT ACCTACGACG TCGAATAGAG CGCAGAAAGT TCGTCCCTCG
GGCCAAGAAC CCGATCGAGA GCGGTATTCG AATTCCGCAA GTGCTGGCGT ACAAGCGACG
GGACCTGCGC AACCTCGTTC GCGCGTATCG GAGGAAGCTG GCGATCCGAA CCAGCCTACT
CAAGACGGCC TAGTACACCA ACCCACTCCA CTGAACCTTC TTGCGCTTCG AGATCTATAC
ACGCAAGTTC CGGAACCAAG CTCGTCTCTT CGCCGGTTTG GTTCGGACAC ATTTCTGCAA
CACGGACAGA GCGCAGAAGC CTCGATCGAT CTCCCAGCTG GACCGGAATA CGTTCTTGGC
CCCGGGGATG TTCTGACTTT AAGCATGTGG GGAAGCATTT CCCAGACATT GCCGCGAACT
GTGGACAGGG AAGGCCGGAT TGTGCTGCCC GAAGCTGGTC CTGTCTCGGT CGCGGGACTC
ACGCTCGAGC AAGCGCAAGC TCTGACAGAG AAAATGCTGC GACCGCAGTT TCGAGATGTG
CGGGTACAAC TATCCCTTGC GCGAGTGCGC ACTGTGCGAA TCTACGTAGT CGGTGATGTG
CAACGTCCCG GTGCATACGA TGTGAGCGCC TTGTCGACGG TGGTGAATGC ACTGTTTGCT
GCGGGTGGGC CTACTGCTAT CGGATCCTTG CGGACAGTGC GTCACATGCG AAACAAGGAG
CTGGTGCGCG AAGTTGATCT GTACGATTTT CTCTTGCGAG GAATTCACGC GGACGTAGAA
CGCCTCGAGC CTGGTGACAC GGTTCTCGTC CCTCCGGCGG GCCGCCAGGT GACTGTCTCC
GGGATGGTCC GGCGCCCTGC AATCTACGAG CTTCGAGGCG AGAGATCGAT CGACGACGTC
GTCGCTCTCG CCGGCGGACT CCTCGTCTCG GCGTCAACCT CACAGATACG GATCGAACGT
GTCAGGGCGA ACACAGCTCG CGTAACGGAC GAGATCACAG TTAAAAACTC GGACGATGCG
TCTTCGGTTC GGGCATCGCT GCAAGCGTAT GCGGTCGAAG ACGGTGACAG AGTCGTGATT
GCTCCGATCC TTCCGTATAG CGAACGTGCC ATTTACGTGG AAGGGCACGT AATTCGCCCC
GGCAAGATTG CATATCGCGA CAACATGTCT GTTACCGATG TGATCAGATC TTATAGAGAC
CTGCTGCCTG AACCCGCTGA GCGGGCAGAA ATCATCCGGT TGCGTCCTCC CGACTTTCGG
CCGGAAACCA TCGAATTCAA CTTGTCAGAG GCGTTGATCG GCAATAGCCA GATTCACTTG
CAACCGTTCG ACACGATTCG TGTCCTGGGC AGATACGAGT TCGATGCTCC GAAGGTCACG
ATTCAAGGCG AAGTCTTACG GCCAGGCACC TATCCCTTAC CCGAGAAACT TACCGTCGCT
CAGCTAGTGC GCTTGGCAGG AGGTTTTAAG CGTTCAGCAT TAAAAGACCA CGCTGATCTC
ACCAGCTATG ACGTGCAGCA AGGCGCCAGG GTCACGAGTC ATCGCCTGTC GATTGATATT
GGGCGGGCGG TTGATGATGC CGACTCCGCG GCTGACGTCG CACTGAAAAC CGGCGATGTG
TTAACAATTC ACCAGATCGC TGGCTGGAAC GACATCGGCG CCTCTGTGAC TCTAGGAGGC
GAGGTTGCGT ACCCCGGAAC GTATGGCATT CAGGAAGGGG AGCGACTCAG CTCGGTGCTG
AAACGTGCGG GTGGTTTCCG CGACACTGCC TATCCGACCG GTGCGTATTT GTCTCGTGTC
CAGGTGCGAG ATTTCGAAGA GAAGAGCCGC AACGAACTCA TCCGACAAAT TGAAACTACC
TCTGCAGCAA CAAAGATTTC GCCTTCTCTG AGTACCACCG AGCAGGCGGC GACGCTGCAA
TTGATCACGC AGCAGCAGGA ACAAGTACTG CAGCGGCTGC GGAATCAGCC GTCGACGGGA
CGGCTTGTGA TCAAGATCAA TAGTGACATT GCCACGTGGG AAGGTACTCC CATCGATATC
GAACTTAGAT CTGGCGACGT GCTGACGATT CCCAAGCGAC CTGGATTCGT GCTCGTCACT
GGGCAGGTTT ACAACTCGAC CGCGATCACG TATGTGCCGG GGAGGGATGC GAATTGGTAT
TTGCATCGTG CAGGTGGACC GACCGCAATG GCGAGCAAGA AAGAAATTTT CGTCATTCGG
GCGAACGGCT CTGTTGTAGG TCGCGAGTCC GATGAGAGCG CGCTTCACGC CAAGTTGGAC
GCGGGCGACG TGGTAGTTGT GCCTCAAAAG ATCATAGGCG GCTCGATGTT CTGGCGAAAT
CTCCTGGCAA CCGCGCAATT CGTGGCTTCT TTTGCGATCA CTGCTAAGGT CGCTGGACTT
TAA
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| Protein sequence | MRRFVFNTML WSGFTWVLLA AMGVAQQLST PLPAQSDITD ARSSESMSLP ASALINLLKQ
RPDLVIEIKR AAATYLQAKG MDVSEDVITD DMLFERINTD PDFRKSLTSW LWTRGYINQS
DIENAALSQS NSGAEESGST QPFDSQLPTT SNRAQKVRPS GQEPDRERYS NSASAGVQAT
GPAQPRSRVS EEAGDPNQPT QDGLVHQPTP LNLLALRDLY TQVPEPSSSL RRFGSDTFLQ
HGQSAEASID LPAGPEYVLG PGDVLTLSMW GSISQTLPRT VDREGRIVLP EAGPVSVAGL
TLEQAQALTE KMLRPQFRDV RVQLSLARVR TVRIYVVGDV QRPGAYDVSA LSTVVNALFA
AGGPTAIGSL RTVRHMRNKE LVREVDLYDF LLRGIHADVE RLEPGDTVLV PPAGRQVTVS
GMVRRPAIYE LRGERSIDDV VALAGGLLVS ASTSQIRIER VRANTARVTD EITVKNSDDA
SSVRASLQAY AVEDGDRVVI APILPYSERA IYVEGHVIRP GKIAYRDNMS VTDVIRSYRD
LLPEPAERAE IIRLRPPDFR PETIEFNLSE ALIGNSQIHL QPFDTIRVLG RYEFDAPKVT
IQGEVLRPGT YPLPEKLTVA QLVRLAGGFK RSALKDHADL TSYDVQQGAR VTSHRLSIDI
GRAVDDADSA ADVALKTGDV LTIHQIAGWN DIGASVTLGG EVAYPGTYGI QEGERLSSVL
KRAGGFRDTA YPTGAYLSRV QVRDFEEKSR NELIRQIETT SAATKISPSL STTEQAATLQ
LITQQQEQVL QRLRNQPSTG RLVIKINSDI ATWEGTPIDI ELRSGDVLTI PKRPGFVLVT
GQVYNSTAIT YVPGRDANWY LHRAGGPTAM ASKKEIFVIR ANGSVVGRES DESALHAKLD
AGDVVVVPQK IIGGSMFWRN LLATAQFVAS FAITAKVAGL
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