| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0879 |
|---|
| Symbol | |
|---|
| ID | 4069129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 1096881 |
|---|
| End bp | 1098347 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637982886 |
|---|
| Product | radical SAM family Fe-S protein |
|---|
| Protein accession | YP_589956 |
|---|
| Protein GI | 94967908 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.293304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGTCC TTGTGAATCC CCGCGCAACT CGCCCGAAGA ACCGTCGTCT TCCTCTCTCA
GTGCTCGCAC TCGGCGCTGT CCTCGAGGGA CGAGAGGAAT ACGCGATCGT AGATGGCAAT
GTGGATGAGC AACCGGAAAA AACGGTCCTC TCTCTAATTG ACAAGAATCC CGTCGAATTA
CTCGGGCTGA CAGTCATGCC GGGTCCACAG ATGGCCGCGG CAATGGAGAT TTCGCGCAAG
ATTCGAGCAC TGCGCCCACA TGTGCCGATC GTGTGGGGTG GGTACTTTCC TTCCATCTAT
GCGGACGCCA CACTCAATGC GTCTTACGTT GACTATGCGG TTCGTGGCCA GGGAGAGAAC
ACCCTCATTG AATTGCTCGA GGTAGTCCGC GGAGTTAGAT CGCCCGATTC GATTCTGGGC
CTCTCTTTTA AGGATCGGAC TTTTGGCATG CATCGACATA ATGCCGAACG TCCGATGCAA
GGTCCTGACG CATTCCCGTG GAGCCCTTTT CACCGCTTGC GGGTCGAACA GTATCTCCGG
CCGTCGTTCT TTGGAGAGAG GACCGCTGCA CATCACGCGA GTATCGGGTG TCCTTTCCGC
TGTAGTTTTT GTGGCGTGCA CGCTGCCTAC GGGAACCGCG AATTGATGGA GAGTCCAGAC
CGCACGGTTG CGATCCTCTC GCACTTGAAA CAAACCTACG GTGCCGACTC AGTCCAATTT
TATGACATGA ATTTTTTCAT GCGCGAAGAC CACGCGCGGG AGCTAGCGGA ACAAATGCTT
CCGCTGGGAA TGAAGTGGTG GTGCGAGGCG CGCATTGACA CGATGTCCCG CTACTCCGAT
GCCACGCTTG ATTTACTAAG GCGCGCGGGC TGCAAGATGA TCTTCTTCGG AGCGGAATCC
GGAAGCGACT GGGCGCTGAA GGAAATGGAG AAGGGAATTA CGACTGAACA GACATTGACC
GTGGCAGAGC GTATGCAACA GCACGGGATA ATCCCAGAAT TTTCTTTCGT GATCGGGAAT
CCCCGTGATC CGGAACGCGA TACAAGAGAG ACGTTGGCGT TTATTCGCAA AATCAAAACG
CTGAATCCGG CATCGGAAAT CATCATGTAT CACTACACAC CGGTTCCTCA GCGCGGCGCG
ATGTATGGGC AAATTGACGG GAAAATCAAT TTTCCGGCGA CTCTAGAAGA ATGGGCCACC
AAGCGATGGA TGGACTTCAC GCTTCGTATC GATCCCAATA CTCCATGGCT AAAACGTAAG
ACGAAGAAGT TGATTGAAAA CTTTGAAACG GTCGTCGCTT CGCGATGGCC AACGGTACAG
GATATCGCCG CTCCCAAGTG GAGCCGGAAC CTCCTGCGAA CCCTGAGCGC CTGGAGATAT
TGGTTTCGCA TTTACGCGTT TCCCCACGAA CTCAGGCTGG CGCAGCGATT TATCCAGCTA
CGGCGTCCCA AACAGGAGAG CCTGTAA
|
|---|
| Protein sequence | MIVLVNPRAT RPKNRRLPLS VLALGAVLEG REEYAIVDGN VDEQPEKTVL SLIDKNPVEL
LGLTVMPGPQ MAAAMEISRK IRALRPHVPI VWGGYFPSIY ADATLNASYV DYAVRGQGEN
TLIELLEVVR GVRSPDSILG LSFKDRTFGM HRHNAERPMQ GPDAFPWSPF HRLRVEQYLR
PSFFGERTAA HHASIGCPFR CSFCGVHAAY GNRELMESPD RTVAILSHLK QTYGADSVQF
YDMNFFMRED HARELAEQML PLGMKWWCEA RIDTMSRYSD ATLDLLRRAG CKMIFFGAES
GSDWALKEME KGITTEQTLT VAERMQQHGI IPEFSFVIGN PRDPERDTRE TLAFIRKIKT
LNPASEIIMY HYTPVPQRGA MYGQIDGKIN FPATLEEWAT KRWMDFTLRI DPNTPWLKRK
TKKLIENFET VVASRWPTVQ DIAAPKWSRN LLRTLSAWRY WFRIYAFPHE LRLAQRFIQL
RRPKQESL
|
|---|
| |