| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0847 |
|---|
| Symbol | |
|---|
| ID | 4070980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 1050524 |
|---|
| End bp | 1054087 |
|---|
| Gene Length | 3564 bp |
|---|
| Protein Length | 1187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637982856 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_589926 |
|---|
| Protein GI | 94967878 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.46168 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTCG ACATCAGCCG CGTCACCTTC GATCCGTGGA AGGACTTCAG CAGCGTGGTC
ATGCAACAGG GCCGCGTGCA ACTCGATTCC GATTGGAACG AGTGGCTAGC CGAATTGGCG
CGCCGAATCC GTGCGGGCAC GTACGACTGT TTCGGCCATG CAGTTTATCC GTCCACCACA
CCGAACGCAT TCCTGATAAA GCCGACCGCG GGCTCCGTCA GCATCGGCGT CGGACGCATG
TACGTTGACG GTCTATTGGC CGAGAACCAT GGCCTGCCGG TCCCGCAATC CGGTGGTTGG
ATTCCGCCGA ATCCTCCTGC TCCCGGCGCA CAGCCCGACT GGGACCCCGC ACTCGATGAA
CTCGTCGGCG CAAATCCTCT CGACTATCTG CAGCAACCGT ACTTCCCCGG CATTGCCACC
CAAGCGCCGT TCCCTACCAG CGGCGGCCCC TTCATGGTCT ATCTCGACGT CTGGCAGCGC
TGCCTGACCT TCCTCGAGGA TCCCGATCTC ATCGAGAAGG CCGTCAGCGT TGATACCACC
GGCCGAATTC AAACTGTGTG GCAGGTTCGC CTCCTCGACG TGAGCAAAAC CTCCGGCGTC
ACCTGCACTA CCGCCGACGA CGACATCACG GCGTGGTCCG CGCTCATTCA GCCTTCGGCC
GGACGCCTGA GTACCGGCGT CGTACAATCA TCGCCCTCCG GTCCGTGCTG CCTGGCGCCG
AACACCGGTT TCACCGGCAT GGAGAACCAA CTCTATCGCG TTGAGATCCA TGAGGCCGCG
ACATCGAGCA CGCCCGCAAC CTTTAAGTGG TCACGCAACA ACGCGTCTGT AGCCACCCCG
GTCATGGGCA TCTCGCAGGG GGGCACCGTG CTCACCGTGC AATCCACCGG GCGGGACAAC
GTTCTTCGCT TCAACGCGAA TGATTGGGTC GAAATCACCG ATGATTGGCT CGAACTCAAC
GGTCAGCACG GCGAATTGCG CCAGGTCCTG CTCGTCACGG ATTCCAATAA CACCATCAAG
CTGTCGGCAG CTCTTCCAGC GGCAAGTTTC CCCGTCGACG CCAACAACCT CACCGATCCC
ACCCGCCATA CGCGCGTGGT GAAATGGGAC CAGAGCGGCA AAGTCTTCCA GAGCGACGGC
ACTACCCAAT GGACCGATCT CGACGCCTCC GTCAGTACCG GCGCTATCCC CGTTCCGTCG
CCCGGAACCG CACTCATCCT CGAAAACGGC GTGACCGTTT CGTTCGACTT GAATCCCGGC
ACTGGCGCCT TTCACGTCGC GGACTACTGG AATTTCGCAG CACGCACCGT AGACGGCACC
GTCGAGAAAC TCGTCGAAGC GCCGCCACTC GGAATCCATC ACCACTACGC TCGTCTTTCC
GTGCTCACCC TGCCTGACTC TGCAACCGAT TGCCGGATTG AATGGCCTCC GCAATCTGGC
GGCGGCGGCG AATCCGGCTG CGACTGCCAA TCCTGCGTCA CTGCCGATAC CCACAACGGC
GGTAGCTGGA CGATCCAGCA AGCCATCGAC TTCGTACTTG GCCAGGGTGG TGGGAAGGTC
TGTCTCGGCC CGGGCGTTTA CAACGTCGCG TCAACAATCA ACATCGGCGG CGGAAATGCC
GCAGCCGTGA ACCTTGCAAT TGAAGGCCAT GGGCTGCCAA CGCTCGTGCC CACCGGACAG
TTCGAAACCA ACGCCATCAT GCGCGTGCAA AACGCCGTTG ACATCGACAT TGACGCAATC
GCCTTCTCAG GTGGAGCTTC GTTCAGCGAT ACCGGCGCCT TCATCTCCGG ACCTGTCGCG
CTCGTCATTG CGCAAAGCGC TTACGTGCGC GTGGAGCATT GCGCGTTCGG GACTGCTGCC
GATCAGCGGC AACTTTCCGC CGGAGTCGCT CTCGCCGACA CCATCATTCT CAACTGCACC
CTCCGCGAAA ATCTCTTCAC CAACGTTGAC ACCGGCGTTG CGGTTCACGC CGAGAAGCTC
GCGGTTATGC AATTCCTCGC CGAAGAAAAC CAGTTCTACT GCACCAATGC AGCTTTCAAC
TGCTCCGGTC CCGCGAGTTT GCTGGCATCG GAAGTTCGGT TTGCGAAGAA CTTCGTCCAG
GCGGCTAGCG GATTCACGCT CATCGGCACT GGTCTCGACG TCACTGTCGA ATCCAATACC
TTCCAGATCA CCGCCGCCAC CGCATCCGAT ACGGCTGCTT ACGATGCCGC CGTCATCTGC
AATATTTCGC AAACCCGAGT CCTCAACAAC GAGATCTCTC GCACCACAAC CGACGTGAGT
GTCAACACCA GCGCGAACAA CAAAGGCGGG CTCACCGCAG CCACCTACTC CTGGCTGGTC
ACGGCGCTTC TGCCGTCCGG CCGCGAGGTA TTGCTCACCG CAAATGCGAC CGTCATCGTC
TCCAGCCCGT CGAATGCCAC TCTCGCTTGG GCGGCGTTCT CCGGAGCGAA GAGTTACAAG
ATCTATCGCA CCGTCGCCAA CGGCGCGGTG TTCCTGCTCG CCGGCACCGC ACCTCAAACT
GGCGGAGCGA CCATCTCGTA CGACGACACT GCCGCTGACT CCGCGCTTCA GAACCAACTT
CCGGCAATGC AGAACGACGG CATCGTTATC GGCAGCACCG GCCCGACGGT CTCCACGAAT
CTCGCCGCCG ACACCACGCT CACGCCGATC TATGGCATCC AGATCGTCGG CAACCGCCTC
AATGCTCTCG CCGGAACAGG CATCCTCTCA CCAACAGGCA GCTACATGCT CGCAACCTTG
ATCGCGCAAA ACCAGATGTC CTCGATCGGC GGCGACGGTA TCTTGCTCTC CGGCGCTTAC
ATCGATCTCG ACATCGTCCA GAACTCACTG CTTTCTGTCG CGCAACTACC GAATGACTCA
AAGCAGATCG CGGGAATTCA AGTGCGTGCC ACGCTCGATG CCAACATCAG CGAAAACCGT
ATCGCGCAAC TCGGCCCCCA AACTGGCGAC ACCGGGGCGA GCCGCCGCGC TATCTACGTC
CTGCTTGGAA TGGATGTTCG CATCGCAGGC AACCAGGTCA CCGACGCCGG CCCCAGCGTT
TCGCCATCGC GCGGCATCAT GTGCTCTGTA CTAGGACGCC TGGATGTCAC CGACAACAAC
GTTCGTCGTG CGACTGCACC GCCCGCGACC CCAGACAAGT CCGCGTGGCT CGCGCTCCTC
GCGACCGGCG ACGTCGTCAG CGTGCAAGAC AATCTCTTCG AGTCCTACGG CGGCGCAACG
CCGTCGTTCC CTGGGACGGT GGTGATCGCT TCCATCCAGA CCTGCACGTT CAGCGACAAC
CAGTGCTTCC TCGACGATCC CAACAACTCC GGGCTCGACC TCGTCGTCGA AATCGAAGCT
CTCTCCATCA TCGCAATGGG CAACCGCGTG AAAGGCCCTG CCTCTGGGGT CGTTGCGAAT
GCGCCGCCAC CGTCGATGAT TCTGGTTGTG CCGGGGGGCG ATAAACCGGC GGTCACCGTG
ATCGGCAACA TCACTACCAT GGGCATCCAG GTGCAGCCAT CGGGTATGCC TGCAGCCATG
GCTCCACTGA ATATCACCGC ATAG
|
|---|
| Protein sequence | MSFDISRVTF DPWKDFSSVV MQQGRVQLDS DWNEWLAELA RRIRAGTYDC FGHAVYPSTT
PNAFLIKPTA GSVSIGVGRM YVDGLLAENH GLPVPQSGGW IPPNPPAPGA QPDWDPALDE
LVGANPLDYL QQPYFPGIAT QAPFPTSGGP FMVYLDVWQR CLTFLEDPDL IEKAVSVDTT
GRIQTVWQVR LLDVSKTSGV TCTTADDDIT AWSALIQPSA GRLSTGVVQS SPSGPCCLAP
NTGFTGMENQ LYRVEIHEAA TSSTPATFKW SRNNASVATP VMGISQGGTV LTVQSTGRDN
VLRFNANDWV EITDDWLELN GQHGELRQVL LVTDSNNTIK LSAALPAASF PVDANNLTDP
TRHTRVVKWD QSGKVFQSDG TTQWTDLDAS VSTGAIPVPS PGTALILENG VTVSFDLNPG
TGAFHVADYW NFAARTVDGT VEKLVEAPPL GIHHHYARLS VLTLPDSATD CRIEWPPQSG
GGGESGCDCQ SCVTADTHNG GSWTIQQAID FVLGQGGGKV CLGPGVYNVA STINIGGGNA
AAVNLAIEGH GLPTLVPTGQ FETNAIMRVQ NAVDIDIDAI AFSGGASFSD TGAFISGPVA
LVIAQSAYVR VEHCAFGTAA DQRQLSAGVA LADTIILNCT LRENLFTNVD TGVAVHAEKL
AVMQFLAEEN QFYCTNAAFN CSGPASLLAS EVRFAKNFVQ AASGFTLIGT GLDVTVESNT
FQITAATASD TAAYDAAVIC NISQTRVLNN EISRTTTDVS VNTSANNKGG LTAATYSWLV
TALLPSGREV LLTANATVIV SSPSNATLAW AAFSGAKSYK IYRTVANGAV FLLAGTAPQT
GGATISYDDT AADSALQNQL PAMQNDGIVI GSTGPTVSTN LAADTTLTPI YGIQIVGNRL
NALAGTGILS PTGSYMLATL IAQNQMSSIG GDGILLSGAY IDLDIVQNSL LSVAQLPNDS
KQIAGIQVRA TLDANISENR IAQLGPQTGD TGASRRAIYV LLGMDVRIAG NQVTDAGPSV
SPSRGIMCSV LGRLDVTDNN VRRATAPPAT PDKSAWLALL ATGDVVSVQD NLFESYGGAT
PSFPGTVVIA SIQTCTFSDN QCFLDDPNNS GLDLVVEIEA LSIIAMGNRV KGPASGVVAN
APPPSMILVV PGGDKPAVTV IGNITTMGIQ VQPSGMPAAM APLNITA
|
|---|
| |