| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0843 |
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| Symbol | |
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| ID | 4070976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1046364 |
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| End bp | 1048505 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637982852 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_589922 |
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| Protein GI | 94967874 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGA AAGTCGAACC CTCCGCCGAA GAAATCGGTC GTCTCCAGCG GTGTATCAGC
GACCTCATTG GTGTCGTTGC ACTTCCCACC ATGTGGAGCG GCGGCGATCC TGAACAAGTC
GCTCGTACGC TTCTCGAAAC GCTGGAAGGC GTGCTCCAGT TGGACTTTGC TTTCCTTCGC
CTTACGAATC CTCCGTCAGA GCTGCTGCGT ACAAGCGCCC TGACGCCGGA GCAGGTTCGT
GCGATCGTCG CCCGATCTCT GGACGACACC CCCAATGCAG TGTGTCGTGC CGAGCTTAGT
TCGGGACGCG ACATTTCGGC GATCTCCGTG CATCTCGGCT TGCACGGCGA ATTCGGCGTA
CTCATCGTCG GGTCCCAACG CTTCGAGTTC CCCCAGCAAA CCGAACGACT GTTGCTGAAT
GTGGCCGCGA ACCAGGCAGC CATCGGTTTG CAAGAGGCAC GCCGCTTCGG AGAGCAAAAG
CGCATCGCTC GTGAACTTGA CGACAAGGTA GCGCAGCGCA CCCGAGAACT CGCTGACGCG
AACGAGGCCC TTCGCCACGA AATCGAAGAT CGTAAGGAGA TTGAAGCGCG CCTCCTCGAG
AGTAAAGAAC AGCAATACCA CGTCCGAGTG GAGCTGCAAA AAGCGCTCGA TGAAATCCGC
AAGTCCGAAG CGAAGTTGCA CCAGGTCATT GACACCATCC CCACCCTCGC CTGGTGCAAC
CTGCCCGACG GGCCCAATGA GTTCCTCAGC AAACGATGGC ACGAGTACAC CGGACTCTCG
CCGGAAGAAT CGCATGGCTG GGGTTGGCAA ACCGCGTTTC ATCCTGAAGA TCTGCCGGCG
CTGATGAAAA AGTGGATGGA ACTGATCGAG ACCGGAGAAC CGGACGAAAT CGAATCGCGC
CTCCGCCGTT ACGACGGCGT TTATCGATGG TTCCTCATCC GCGTCGAACC CTTCCGAGAT
GAGACCGGAA CCATCGTGCG CTGGTACGGC ACCAGCACCG ATATCGAAGA ACGCAAGCAG
GCAGAAGAAC GATCGCGCCG CAGCGAAGCA TTCCTCGCTG AGGGTCTGAA CCTTGCGCGT
GTAGGAAACT TTTCCTGGCT CGTGGAAACC GACGACATCA AGTGGTCCGA CCAGCTCTAC
CAGATTTTCG AATTTGAGCC CGGCCAGCCG ATAACCTTCG AGAAAATTGG CTCTCGCGTA
CATCCCGACG ACGTGCACAC GTTGTACAAC ATGATCGAAA AGGCCCAGCG TAACGTGAGC
GACTTTGAAT ATGAACATCG CTTGCTCATG CCGGATGGAA GCGTGAAGTA TTTGCGCCTG
GTAGCTCACG CCGGCCGCAA CTCCGAACAC CAAGTCGAGT ACATCGGTGC GGTTCAGGAT
GTAACCCAGC GCCATCTCGC TGATGATGCC TTGGCGCGCG CGCGCTCGCA GTTGGCAAAC
GTGTCGCGGG TCACCAGTCT CGGCGTCCTG ACTGCGTCCA TCGCGCACGA GGTCAATCAG
CCACTTTCGG GCATCATCAC CAACGCCAGT ACTTGCCTCA GGATGCTTTC CGCGGAACCG
CCGAATGTCG AAGGCGCTCG CGAAACCGCA CTGCGCACCA TTCGCGACGG CAATCGCGCC
GCCGACGTCA TCTCCCGATT GCGCACACTG TTCACGAGAA AGGACCGGTC CGCCGAGGCC
GTCGATCTCA ACGACGCGAC CAAAGAGGTG ATCGCACTTG CTTTGAATGA ATTGCACCGC
GGAAAGGTGG TCTTGCGGCC GGAACTCGGA GATGACCTTC CACCCGTCAT CGGTGATCGC
GTCCAACTCC AGCAGGTGAT CATGAACCTC ATGCGCAATG CCTCCGACGC GATGAGCACC
ATCCACGATC GTCCTCGGGA TCTATTGATC CGCACCGAGT CGGACGGCGA GGCCGTACGC
TTGAGCGTCA CGGATTCCGG CGTAGGCTTC GATGCACAAT CCGCCGACCG GCTCTTCGAG
GCCTTCTATA CAACCAAAAA CGATGGTATG GGGATCGGCC TCTCCATCAG CCGCTCCATC
ATCGAGGCCC ACCAGGGGCG GCTCTGGGCA ACACCGAACC AGGGCCCCGG CGCCACCTTC
TGCTTTTCGC TTCCGTGCAG CACTGATACC AAAGTCCAAT AG
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| Protein sequence | MSQKVEPSAE EIGRLQRCIS DLIGVVALPT MWSGGDPEQV ARTLLETLEG VLQLDFAFLR
LTNPPSELLR TSALTPEQVR AIVARSLDDT PNAVCRAELS SGRDISAISV HLGLHGEFGV
LIVGSQRFEF PQQTERLLLN VAANQAAIGL QEARRFGEQK RIARELDDKV AQRTRELADA
NEALRHEIED RKEIEARLLE SKEQQYHVRV ELQKALDEIR KSEAKLHQVI DTIPTLAWCN
LPDGPNEFLS KRWHEYTGLS PEESHGWGWQ TAFHPEDLPA LMKKWMELIE TGEPDEIESR
LRRYDGVYRW FLIRVEPFRD ETGTIVRWYG TSTDIEERKQ AEERSRRSEA FLAEGLNLAR
VGNFSWLVET DDIKWSDQLY QIFEFEPGQP ITFEKIGSRV HPDDVHTLYN MIEKAQRNVS
DFEYEHRLLM PDGSVKYLRL VAHAGRNSEH QVEYIGAVQD VTQRHLADDA LARARSQLAN
VSRVTSLGVL TASIAHEVNQ PLSGIITNAS TCLRMLSAEP PNVEGARETA LRTIRDGNRA
ADVISRLRTL FTRKDRSAEA VDLNDATKEV IALALNELHR GKVVLRPELG DDLPPVIGDR
VQLQQVIMNL MRNASDAMST IHDRPRDLLI RTESDGEAVR LSVTDSGVGF DAQSADRLFE
AFYTTKNDGM GIGLSISRSI IEAHQGRLWA TPNQGPGATF CFSLPCSTDT KVQ
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