Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0821 |
Symbol | |
ID | 4072347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1018800 |
End bp | 1020221 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637982830 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_589900 |
Protein GI | 94967852 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4564] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTTG AAACAAACGA AGAGGTCAAG GCTCGCTTCT CCGACGCCTT CAAAGCAAGT CCCGTCGGAA TCGTCGTCGA GAACTTAGAT GGGCAGCCGC TCTTTGTGAA TCCAGCATTC TGTTCGATGT TGGGATTTAC CGAGGAAGAG TTGCGCAATA AGCATTGTGT GGATTTTTCT CCGCAGGAAG ATGCTCAAAA GGACTGGGTC CTGTTTCAGC AGCTGCGCGA AGGATCAATC GACCATTATC AAATCGATAA ACGCTATTTC CGAAGCGACG GTACAACCGT CTGGGGACGC CTCACTGTTT CGTTGCTTCG TGGCAAACCC TCTCCGCTTG TGCTTGCGAT GGTGGACGAC ATCACTGAAC GTAAGCTTGC CGAAGAAGCC CTCAGTGAGA GCGAAACACG GTTCCGCAGC ATCTTTCGAG ATGCTGGAAT CGGCATGGTG ATCGTTTCTC TTGATGGGCG TTATCTCTCT GCCAATCGCG CCTTCTGCGA CTATCTGGGA TATTCAGAGC AAGAAATTCT TGGCAAGACG ATTGAATCGA TCACTCTCCC GGCGGATTGG CCGGCGTTTT CAGAAAAGAT GCGCGAAGCA CTCTCGGGTC AAGGATTTCA GTGGTTACAT AAACGCTGCC TGCACAAGAG TGGCCGAATC GTCTACACGG AGACTAGTTC ATCAGTCATT CGCGATCGTG AAGGCGTCGC GCGGTATTTC GTAGCCCAGA TTCTGGACAT TACGGGTCGC AAGGAAGCCG AAGAAGCGCT TTCAGCCATG ACGCGAAAGC TGATAGAAGC TCAAGAGCAA GAACGCGCCC GCATTGCGCG CGAGCTCCAT GATGACATCA GTCAACGTTT GGCTGTGCTG GCGATTGATC TCGATGGCCG GGAAGGTGTT CCTCAAGAGG TTCAATCCCA TCTGGAAAAA TTTCGGCTCC AGGTGGTTGA AATTGCCAAT GACGTGCACG GCTTGAGTCA CGAGTTGCAT TCTTCGAAGC TGGAGCTTCT TGGAGTGGTC ACAGCTATGA GGAGCTGGTG TCAAGAAGTG GGTCGTCGGC AAAAAATCGA CGTCGATTTC GCGAGCGATG TTTCGACCTC AATCCCTCCG GAACTCGGCC TTTCGCTTCT GCGGGTGCTC CAAGAGGCAC TCCATAACGC CACCCGACAC AGCGGGACGC AGCGAGTTGA AGTACGGCTG GAAGAACGCT CGAATGAACT CCATCTCCTG GTTCGCGACT CGGGTAAAGG GTTTGATGTC GAATCGGCAC TGCGAAGTCA AGGCCTCGGC CTTACGAGCA TGCGTGAACG CGTTCGTTTG CTAAATGGCA GGTTGACCGT TCAATCGCAG GCCCGTTGCG GCACTGAAGT TCATGCCCGC GTCCCCTTCA ACCCCGATCA AAATCGGTCT TTGAAAGATT GA
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Protein sequence | MQLETNEEVK ARFSDAFKAS PVGIVVENLD GQPLFVNPAF CSMLGFTEEE LRNKHCVDFS PQEDAQKDWV LFQQLREGSI DHYQIDKRYF RSDGTTVWGR LTVSLLRGKP SPLVLAMVDD ITERKLAEEA LSESETRFRS IFRDAGIGMV IVSLDGRYLS ANRAFCDYLG YSEQEILGKT IESITLPADW PAFSEKMREA LSGQGFQWLH KRCLHKSGRI VYTETSSSVI RDREGVARYF VAQILDITGR KEAEEALSAM TRKLIEAQEQ ERARIARELH DDISQRLAVL AIDLDGREGV PQEVQSHLEK FRLQVVEIAN DVHGLSHELH SSKLELLGVV TAMRSWCQEV GRRQKIDVDF ASDVSTSIPP ELGLSLLRVL QEALHNATRH SGTQRVEVRL EERSNELHLL VRDSGKGFDV ESALRSQGLG LTSMRERVRL LNGRLTVQSQ ARCGTEVHAR VPFNPDQNRS LKD
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