Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0792 |
Symbol | |
ID | 4068573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 979598 |
End bp | 980290 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637982799 |
Product | hypothetical protein |
Protein accession | YP_589871 |
Protein GI | 94967823 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.461993 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.205687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACGCTC GATATGCAGT AATTCTGGCC GCAGCGATGT CCCTCGCCAG CGCGCCGACT GTTCTGCCGG CACAAGCGCC GCCGGCAGCG CCCGCAAACG TTCTCGCGGA CGGTACGCCC GTCCATCTAG TTCTTGCTCG CATGGTTTCG TCAGAGACAG ACCAACCGGG AGAACTCGTC GAGTTCGTCG TGAAAAAAGA CGTTCAGCTA AATGGGAAGG TCCTGCTCCC TGAGAATGCG TACGTCTACG GCAAAGTGGT TGCCGCGCAG CTCGACAACC GCGAGGCTGG CAAAGCCGGC TCGGTCGAAT TCCGCCTCGA ATCGCTGAAG CTCACGAGCG GGCAGGAAAT CCCGCTGCGT ACGATCAGAC AGATTCCAAG CGGCGCCGGC AGCGACATCA AGCCTGAATC GCTGACCAAC CTCGTCAACT CTCCGTATGC GCCTTTTGCG CATTTCAATA ACGGCATGAC TTGCACCGTT CCCAAGGATT CAATGCTGAC GCTCTATGTT TCAGGCGATG TCGCCATTGG CCAAGCCGCG GTCGCCAAGC AGGTCACACA GGAACCGGCC GAGGATTCGG TGGCGAGCCG CATTGTGGAC ACGGCCAAGC CTGGAAAGTC GTTGGGCGAT ATTGCTCGCG AACAGCGTGA TCGTGGAAAG ATTGGCGGCG GCATGGTGAG TTCTCCGCAA TAA
|
Protein sequence | MHARYAVILA AAMSLASAPT VLPAQAPPAA PANVLADGTP VHLVLARMVS SETDQPGELV EFVVKKDVQL NGKVLLPENA YVYGKVVAAQ LDNREAGKAG SVEFRLESLK LTSGQEIPLR TIRQIPSGAG SDIKPESLTN LVNSPYAPFA HFNNGMTCTV PKDSMLTLYV SGDVAIGQAA VAKQVTQEPA EDSVASRIVD TAKPGKSLGD IAREQRDRGK IGGGMVSSPQ
|
| |