| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0787 |
|---|
| Symbol | |
|---|
| ID | 4068568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 976446 |
|---|
| End bp | 976787 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637982794 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_589866 |
|---|
| Protein GI | 94967818 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.614928 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.190225 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGATT GTCTTTTCTG CAAGATCGTC GCCGGTCAGA TCCCATCGAA GAAAGTGTAT
GAAGACGAAA AAGTCTTCGT TTTCCAGGAC ATCAATCCGC AAGCGCCGAT TCACTTCCTC
ATTATTCCTC GCCAGCACAT CGCCGGCCTG AAAGAAGCCA GCGAAGCCGA TGCCGAGATC
ATCGGCTACT GCCACCTGAT CGCCGCCAAA CTCGGCAAGC AATACAACGT CGAGGACGGT
TACCGCACGG TGCTCAATGT CGGGCCGAAG TCCGGCCAGT CAGTCTTCCA TCTTCATCTG
CATTTGCTTG GCGGACGCGA TCTCACGTGG CCACCCGGAT AG
|
|---|
| Protein sequence | MSDCLFCKIV AGQIPSKKVY EDEKVFVFQD INPQAPIHFL IIPRQHIAGL KEASEADAEI
IGYCHLIAAK LGKQYNVEDG YRTVLNVGPK SGQSVFHLHL HLLGGRDLTW PPG
|
|---|
| |