| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0754 |
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| Symbol | |
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| ID | 4068630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 930963 |
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| End bp | 933599 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637982760 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_589833 |
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| Protein GI | 94967785 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.535392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGT TCCCGAGCTT CGGTTCTGAG CGGCGTAAGC GCGAATTGCA GGAAGAGATG
GATGCTCACC TGCAGATGGC GATTGCCGAT CGAGTGGCGC GAGGCGAGAC GGTAGAGACG
GCGCGACAAG CGGTGCTTCG GGAATTTGGA AATATTCCCC TGGTGCAGGA TGTGACGCGC
GACATATGGG GCCTGACCTG GCTTGAACAG CTAAGCCGGG ATCTCCGTTA CGCGTTACGG
CAACTGCGCA AAAGTCCCGG TTTCACGATC ACCGCGACGA CGATGCTGGC AGTAGCCATC
TGCGCCAACA GCACCGTATT CAGTTGGATC GACGGTACGA TGTTGCGTCC CATTCCTGGC
GCGCGGGACA CGGGCGATCT TGTTAGCCTG CAGCGGGGAG AACGGAACTT CTCTCCGACT
CCGCCCTTCT CGTATCTCGA CTATCGCGAT CTGCGCGAGC AGAACCACAC CTTCACCGGA
ATCCTCGCAT ATCATCACGA TTGGATCACG CTGACTGGCG GCGCACAGCC GGAGCGTGCC
TATATTGCGA ACGTGTCGGC AAATTATTTC GATGTGCTCG GCATTAAGCC GGTGCTGGGG
CGTTTCTTTC TGCCTGAAGA AGAGACGGCT CCAGGTGCCG TTCCCAACGT GGTCCTGGGT
TACTCGCTTT GGAAGACGCG CTATGCCAAA GACCCGGCGA TTGTGGGCAA GTCGATCGAG
ATCGCCCGGC ATCCTTTGAC GGTCATCGGC GTGGCGCCGG AGGGGGTTGT GGGAGCGATG
CCCGGGATCC GTGAAGATCT GTGGGTAACG CTTGATCCCC TCGGGACGGA TGCGTGGCGG
ATGACGCATC GCAGTGGTGG TGCGGTCTGG CTGAATGTAA TTGGAAGATT GCGGCCCGAC
GTGAGCCGTG CCCAGGCAGC CCAGGACCTC GACACGGTGA TGCACAACAT CGTGGTGGCG
TATCCGGACG ATCATCTCGG CGATAACCGC ATCTCGCTGG ACCCCATGTG GCGCTCCCCA
TTCGGCGCCA ACGGATACCT GGCAACGACG CTGCCCATTC TGCTCGCCTT TGCCGCTGTG
GTGCTGTTGC TGACCGGCGC GAACGTCGCT ACGCTCACGC TAGTACGGTT TGTATCCCGG
CGGCGTGAGC TTGCCATCCG GCAGTCGCTC GGGGCGAATC GTATGCAACT GGTACGGCAG
CTGGTGATGG AGGGCGTGGT GCTTTCCATC GTCGCAGGAG CCGCGGCCCT TGGGTTGACA
GCGTGGACAT CGAAGACATT CGCATGGTTC TTTCCGGCGA GTTCGAATCC CATCATTCTG
AACGGGAGCA TGGACCATAG GGTGGTAATC GGGATTGCAG TGTCGTCCCT GTTGGCCGCG
ATGCTGTGCG GCGCGCTTCC CGCCTGGCGT TCGGCCCACG CGCCGGCAGC TGAGGTACTC
AAGGCAGAGT CTGCAAGTAT CTCCGGCGGA TCACGCAACC GGAAATTGCT CAGCGGGCTG
GTGGTTGCGC AAATCGCGCT TTCACTGCCG CTGCTGTTGT GTTCCGGGTT GTTTCTGCGA
ACACTGCGGA ATCTCGCCCA CGCGAATCCC GGATTTGAAC AGGACCACAT TCTGACTGCG
ACTGTGGGGC TAAATATCGC CGGCTACAGC CACGACGAGG AACAGCTGAT CCGTCACAAG
ATACTTGATC GCGTGTCGGC ACTCCCCGGC GTAAAGGCTG CGTCTTTTAC GGACTGGATT
CCGATGACCC TGGGCCACAA GGGGGAGGAT GCGTATCCGG AAGGGTATGT GCCACACCCG
CATGAATCTT TGCAGGTGTA CCACGCCGAG GTGGCCCCGC GGTATTTCGA ATCCCTTCAT
ATACCCATTC TGGAAGGTCG CGAGTTTACG CCGGATGACG ATGAAAAGGC CCCGCGGGTA
CTCATCGTGG ATCAGACGGC GGCGAGGCGA TACTGGCCCG GACAGGATCC GCTGGGAAAG
AGACTCAGGA TATGGGGCCG CCTTTTCACG GTCGTCGGCC TCGCGAAAAA TTCAACACAT
ATGTTGATGA ATGAGTCCCC GGAGCCCATG GTGTATATGA GCTTCTTCCA GGAGGGGTAC
GAGACGATCG TGCAGGTGAA GACCGAGGGA AATCCGGCCG ACTTTGCGCC AGCGGTGGAG
AACGCCATCC ACGAAATTGA TCCACGGCTC CCGGTTTTCG ATGTGCGTCC CATGCGCGAG
AGTACCCAAC TGGCGAGCAG TTTCGCCGTC ATAGAGAGCG CCCTGGCGGG AATGTTCGCG
ATGATCGGGC TGGTTCTTGC GGCAACCGGC ATCTACGGCG TGGTGGCATA TCGAACCCAA
ATGCGTACCC ACGAGATCGG AATACGAATG GCTCTGGGTG CTTCGCGCGT CAACGTGCTG
CGGCTCGTGC TGTCGCAGGG ATTATGGCTC ACAGCCATTG GGCTGACGCT GGGATTGGCG
TTTGCAATGG GACTGACACG TTTCATCGCC CGACTGTTGT ACGGAATCGG CGCCAACGAT
CCGGTCACCG TCGTTTCCGT CGTCATGCTC CTGGGAGCAA TGTCGTTGCT GGCATGCTAC
CTTCCCGCGC ATCGAGCGAT GCGCCGAAAC CCTGTGACTG CGATTCGCGA ACTGTAA
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| Protein sequence | MKLFPSFGSE RRKRELQEEM DAHLQMAIAD RVARGETVET ARQAVLREFG NIPLVQDVTR
DIWGLTWLEQ LSRDLRYALR QLRKSPGFTI TATTMLAVAI CANSTVFSWI DGTMLRPIPG
ARDTGDLVSL QRGERNFSPT PPFSYLDYRD LREQNHTFTG ILAYHHDWIT LTGGAQPERA
YIANVSANYF DVLGIKPVLG RFFLPEEETA PGAVPNVVLG YSLWKTRYAK DPAIVGKSIE
IARHPLTVIG VAPEGVVGAM PGIREDLWVT LDPLGTDAWR MTHRSGGAVW LNVIGRLRPD
VSRAQAAQDL DTVMHNIVVA YPDDHLGDNR ISLDPMWRSP FGANGYLATT LPILLAFAAV
VLLLTGANVA TLTLVRFVSR RRELAIRQSL GANRMQLVRQ LVMEGVVLSI VAGAAALGLT
AWTSKTFAWF FPASSNPIIL NGSMDHRVVI GIAVSSLLAA MLCGALPAWR SAHAPAAEVL
KAESASISGG SRNRKLLSGL VVAQIALSLP LLLCSGLFLR TLRNLAHANP GFEQDHILTA
TVGLNIAGYS HDEEQLIRHK ILDRVSALPG VKAASFTDWI PMTLGHKGED AYPEGYVPHP
HESLQVYHAE VAPRYFESLH IPILEGREFT PDDDEKAPRV LIVDQTAARR YWPGQDPLGK
RLRIWGRLFT VVGLAKNSTH MLMNESPEPM VYMSFFQEGY ETIVQVKTEG NPADFAPAVE
NAIHEIDPRL PVFDVRPMRE STQLASSFAV IESALAGMFA MIGLVLAATG IYGVVAYRTQ
MRTHEIGIRM ALGASRVNVL RLVLSQGLWL TAIGLTLGLA FAMGLTRFIA RLLYGIGAND
PVTVVSVVML LGAMSLLACY LPAHRAMRRN PVTAIREL
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