| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0715 |
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| Symbol | rplT |
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| ID | 4069787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 877864 |
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| End bp | 878229 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637982721 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_589794 |
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| Protein GI | 94967746 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.884978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTCGCG TAAAACGTGG AACTAAACGG CGCGCCAAGC GGAAGAAAAT ATTAGAGCGC
GCATCCGGAT ATTACTTAAC AAAATCAAAG CTCTACCGGT CAGCAAAAGA GTCGGTTGAG
CGCGCGCTGA AGTTCGCTTA CACGGGCCGC AAGCAGAAGA AGCGCCAGTA TCGCTCGATC
TGGATCGTGC GTATCGGCGC CGCGGCGAAG TTGAATGGCT TGAGCTACAG CCGATTTATC
AGCGGCCTGA AGAAGGCCGG GGTGGAACTC GACCGCAAGA TGTTGAGCGA GATCGCGATC
CACGACCCGC AGGCCTTCGC AGTGTTGGCG GAGCAGGCAA AAGCCGCTCA ACCCGCAGCA
GCGTAG
|
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| Protein sequence | MPRVKRGTKR RAKRKKILER ASGYYLTKSK LYRSAKESVE RALKFAYTGR KQKKRQYRSI
WIVRIGAAAK LNGLSYSRFI SGLKKAGVEL DRKMLSEIAI HDPQAFAVLA EQAKAAQPAA
A
|
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