| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0692 |
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| Symbol | |
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| ID | 4071337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 852741 |
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| End bp | 854603 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637982698 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_589771 |
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| Protein GI | 94967723 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAGA ATTTCAAGCC TTTAAATCCG GAAGAGAGCG TCGTGCGCCT CGCCGCCATC
GTGGACTCGT CCGATGACGC CATTCTTGGT ACCGACACCC AAGGCACCAT CAACACCTGG
AACCCTGCTG CCGAGAAAAT GTTCGGCTAC TCCGCCGACG AAATCCTCGG CCAATCAGTC
CTGCTGCTCA TTCCCCCTTC ACTGCATGCC GAGCACGCAG AGAACTTCGA GCGCATTGCC
CGGGGCGAGC GTATCGAGCA CTACGAAACC CAACGTTTGC AGCGAGGTGG CGGACGCATT
GATGTATCGT TTACGCTTTC CGGCATTCGA GACCGCGAAG GCCGCATGCT CGGCGCGGCC
ATGATTGCTC GGGAACTGAG CGCAAAGCGG CGGGACGAGG CGGTCCGTGC CCGGCTCGCC
GCGATTGTCG AGTCCTCGGA CGACGCCATC ATCGCCAAGG ACCTCAACGG TGTCGTCACG
GACTGGAATG CCGCCGCCGA GCGCCTCTTC GGATATAAAG CCGAAGACAT CATCGGACGC
TCCATTCTCG CCATTATTCC CCCCGAACTT CAGCACGAAG AGCCGGTGAT TCTTTCCAAA
ATCCGCGCCG GGCACCGCAT GGAACATTAT GAGACCCATC GCCTTCATAA ATCAGGGCGC
CGCTTGGAAG TCTCAGTCAC AATTTCCCCG ATCCGCGACT CGTCTGGCCG CGTGATTGGC
GCCTCGAAGT TCGCTCGCGA TATTTCCGAA AAGCGCCGCC TCCAGACCGT TCGGAGCATT
CTCGCCGCGA TCGTCGAGTC TTCGGACGAC GCCATCGTCT CGAAGAACCT CGACGGCGTC
ATCACCAGTT GGAACGCCGC CGCGGAGCGC TTGTTCGGTT ACACCGCTGA AGAGATCATC
GGACAGTCCG TATTACGTAT CATTCCGCGC GAACTTCAGC ACGAGGAACC CGGTATTATT
ACCCGCCTGC GCGCCGGAGA GCGGATCGAT CACTACGAGA CTCGGCGGCG GAAGAAGAAT
GGCGAGAGCA TCGACGTCTC CTTGACCGTC TCCCCCATTC GCGATGAACG CGGCACCGTG
ATTGGCGGGT CCAAGATTCT GCGTGACATC AGCGACCGCA AAATCGCCGA GGCCGCAATC
ATCGAGAAGG AACGCTTTGC TGCCGCCGGA CGCCTCGCCG CGACCCTCGC GCATGAAGTC
AACAATCCAC TCGAGGCCAT CACCAACCTC TCGTACCTGC TCTCCATCCA TGAAGGTCTC
GATTCCGAGG CTGCTAATCT CGCCGCTTTG CTTTTGAAAG AGGTCCAGCG CGCGGGAGAG
ATCACCCGGC AGACCCTGGT GTATTACCGC GAGTCCAAGG TGCCGTTGCT CGTCAGTCTT
CGCGAAGTCG TCGCCAGCGT TCTCCGCGCC AAGCGCTCGA AGCTCGAGCT AAAGAACGTC
CACGTCGATA GCGCCTTACC TGAACCTTTT TTCGTCGAAG GCTATCCGGG TGAGTTGCGC
CAGGTGCTCG AGAATCTGCT CGACAACGCT CTCGACGCCG TGCCCGACGG CGGGCATCTC
CAGATCCAGG GCAGCCGCTC CGTCTCCGCC GCCAACGAGC GCGTCCTCCT CTCGATTTGC
GATAACGGCC CCGGCATTCC CGCCGAACTG GCCGGGAAAA TCTTCGAACC GTTTTTCACT
ACCAAGAAAG AGAAGGGTAG TGGCCTCGGG CTCTGGGTCT CGCAGTCCAT CGTCAAGAAA
CATCAGGGCA CGATCGAAGT TCGCAGCAAC CAGGAAAACC GCGAGACGGT TTTTACCCTC
AATCTCCCTG CTGCCAGGCT TCCCGAGCCC GCGGACCGCC GCTCTCCGGC TGCAGTTTCC
TGA
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| Protein sequence | MSQNFKPLNP EESVVRLAAI VDSSDDAILG TDTQGTINTW NPAAEKMFGY SADEILGQSV
LLLIPPSLHA EHAENFERIA RGERIEHYET QRLQRGGGRI DVSFTLSGIR DREGRMLGAA
MIARELSAKR RDEAVRARLA AIVESSDDAI IAKDLNGVVT DWNAAAERLF GYKAEDIIGR
SILAIIPPEL QHEEPVILSK IRAGHRMEHY ETHRLHKSGR RLEVSVTISP IRDSSGRVIG
ASKFARDISE KRRLQTVRSI LAAIVESSDD AIVSKNLDGV ITSWNAAAER LFGYTAEEII
GQSVLRIIPR ELQHEEPGII TRLRAGERID HYETRRRKKN GESIDVSLTV SPIRDERGTV
IGGSKILRDI SDRKIAEAAI IEKERFAAAG RLAATLAHEV NNPLEAITNL SYLLSIHEGL
DSEAANLAAL LLKEVQRAGE ITRQTLVYYR ESKVPLLVSL REVVASVLRA KRSKLELKNV
HVDSALPEPF FVEGYPGELR QVLENLLDNA LDAVPDGGHL QIQGSRSVSA ANERVLLSIC
DNGPGIPAEL AGKIFEPFFT TKKEKGSGLG LWVSQSIVKK HQGTIEVRSN QENRETVFTL
NLPAARLPEP ADRRSPAAVS
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