| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0688 |
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| Symbol | |
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| ID | 4071333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 846535 |
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| End bp | 847776 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637982694 |
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| Product | L-threonine ammonia-lyase |
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| Protein accession | YP_589767 |
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| Protein GI | 94967719 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form
[TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCC ACACTCCGCA TCGGCCCGCC GCGTCTGTAA CGCTCGAATC CATCGAGCAG
GCGCGCGCCC GCATTCGCGC CGATGTTTAC TTCTCCCCCT GCAACCACTC GCACTCAATC
TCCAAGATCG CCGGCCAGCG CGTATACCTG AAGCTCGAAA ATCTCCAGAT GACCGGTTCC
TTCAAGGAAC GTGGCGCGCT CAACAAAATT CTCACGCTCT CCAACGACGA GAAGCAGCGT
GGCGTCATCG CAGCCAGCGC TGGCAATCAC GCGCAAGGTG TCTCGTTCCA CGCCACGCGC
CATGGCATTC GCGCCCGCAT CGTCATGCCG ATGATGACGC CTTTGGTTAA AGTCAATGCC
ACGCGCGGCT ACGGCGCCGA AGTCATCCTC CATGGCGCCG ACTACGACGA AGCTTACGAA
GAAGCTTGCC GCCTCGCCGC CCTCGAAGGC CTCGTATTCA TTCATCCTTT TGACGATCCG
CAGGTCATCG CCGGGCAGGG AACCATCGCG CTCGAATTGC TCGAGCAAGC GCCCGACATG
GAAGCTGTCG TCGTGCCCAT CGGCGGCGGA GGTCTTATCA GCGGCATCGC TTGCGCATTG
AAATCCCTGC GTCCGGATAT CCGCGTCATC GGCGTGCAGG CCGCGCGTAT GCCTTCCATG
CAAAGTGCAT TGCAAGCGCA CAAGGCGGTC ACCATTGATT CGAACACCAC TATCGCTGAT
GGCATCGCTG TCCGCCGATC CGGCGATCTC ACTGTCCATC TCGTCGAAAG CTACGTCGAC
GAACTCGTCG TCGCCGAAGA AGAAGAAATT GCCAGCGGCA TCCTCACCCT GCTCGAACGC
GAGAAGACTC TCGCCGAAGG CGCCGGCGCC GCAGCAGTCG CCGCCCTGTT ACACCACAAA
ACTTCGCTGA AAAATGAAAA GACCGTTGCC CTCGTTTGCG GCGGCAACAT CGACGTCTCG
TTGCTGGCCC GCATCATCCA GCGCGGTCTT GCCAAAGACG GCCGCCTCGT CCGGCTGCAG
ATCCATCTCT CCGATCGTCC CGGCTCGTTG CATCAACTTA CGCGCCTACT TACCGTGCAT
CAGGCCAACA TCGTCGAATT ACACCATGAC CGCACCTACT ATGGCGTGAA CCTCGGCGAC
ACCATGATTG ACGTCACCCT GGAGGCTCGC GGGGAGGAGC AGATCCAGCA GATCCTCCAC
GGCCTGCGGC AGGAGGGTTA TAGGCATGAG CGCATTGTGT AA
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| Protein sequence | MATHTPHRPA ASVTLESIEQ ARARIRADVY FSPCNHSHSI SKIAGQRVYL KLENLQMTGS
FKERGALNKI LTLSNDEKQR GVIAASAGNH AQGVSFHATR HGIRARIVMP MMTPLVKVNA
TRGYGAEVIL HGADYDEAYE EACRLAALEG LVFIHPFDDP QVIAGQGTIA LELLEQAPDM
EAVVVPIGGG GLISGIACAL KSLRPDIRVI GVQAARMPSM QSALQAHKAV TIDSNTTIAD
GIAVRRSGDL TVHLVESYVD ELVVAEEEEI ASGILTLLER EKTLAEGAGA AAVAALLHHK
TSLKNEKTVA LVCGGNIDVS LLARIIQRGL AKDGRLVRLQ IHLSDRPGSL HQLTRLLTVH
QANIVELHHD RTYYGVNLGD TMIDVTLEAR GEEQIQQILH GLRQEGYRHE RIV
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