Gene Acid345_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0624 
Symbol 
ID4070119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp766313 
End bp767350 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content62% 
IMG OID637982629 
Producthypothetical protein 
Protein accessionYP_589703 
Protein GI94967655 
COG category[R] General function prediction only 
COG ID[COG1090] Predicted nucleoside-diphosphate sugar epimerase 
TIGRFAM ID[TIGR01777] conserved hypothetical protein TIGR01777 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.9123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATCG TGATCCCGGG TGAGTCTGGA CAAGTCGGAA CGATTTTGGC TCGCGCCTTT 
CACCGCGACG AGCATGAAGT GGTTGTGCTC AGCCGCCGTG CACAGGTCCA GCCGTGGCGC
GTCATCGTAT GGGATGGGGC AGCGCTCGGC GATTGGGCAA AAGAACTGGA TGGCTGCGAC
GTGGTGATCA ACCTCGCGGG GCGCAGCGTC AATTGCCGAT ACTCAGAGGC CAATCGGAAG
GAAATCCTCG ACTCCCGCGT GTTGTCGACA CGAGTCGTCG GGCAAGCGAT TGCGAATGCC
GGGCGGCCGC CGCGCGTGTG GCTGCAGGCG AGCACCGCCA CGATCTACTC GCATCGTTAC
GACGGCCCGA ATGACGAGAT ATCGGGTCTC CTCGGCGGCG AGGAACCCAA CGCCCCGAGT
TCCTGGCGAT TCAGCATCGA GGTTGCCCGC GCCTGGGAAG GCGCGTTCCA TGAAGCGAAG
ACCGTCCACA CCCGCAAGGT CGCGCTGCGT TCGGCAATGA CGCTGAGCCC CGATCGCGGT
GGAGTGTTCG ATGCGCTTGT TGGCCTGATG CGGCATGGCC TGGGCGGGCG CGCCGGCGAT
GGGCGGCAGT TTATGTCGTG GATTCACTAC GAGGACTTCG TGGCGGCCAC TGGCTGGCTG
ATCGATCACG ACGACATCGA GGGAATCGTT AACGTCGCCG CTCCGGCTCC GTTGCCGAAC
GCAGAGTTCA TGCGTGCGCT GCGGGCTGCT TTCGGGATGC CGCTTGGACT CCCTGCTAGC
AAACGGATGC TGGAGATCGG CGCCGTCTTC CTTCGGACGG AAACCGAACT CATTTTGAAG
AGCCGTCGAG TGGTTCCAAC CAGATTGCTT GATCATGGAT TCAAGTTCAG ATTTCCGACG
TGGTCGGATG CGGCAGGCCA CCTCTGCCGA CAATGGCTGC TGACCCGCAG CCAACAAAAA
AGGCTGGCGC GGAGGACGCC AGCCGGAGGC AACGAGTTCA ACTGTGTTAG AAGCGGAAGA
TCCCTGAGAA TTCCATGA
 
Protein sequence
MKIVIPGESG QVGTILARAF HRDEHEVVVL SRRAQVQPWR VIVWDGAALG DWAKELDGCD 
VVINLAGRSV NCRYSEANRK EILDSRVLST RVVGQAIANA GRPPRVWLQA STATIYSHRY
DGPNDEISGL LGGEEPNAPS SWRFSIEVAR AWEGAFHEAK TVHTRKVALR SAMTLSPDRG
GVFDALVGLM RHGLGGRAGD GRQFMSWIHY EDFVAATGWL IDHDDIEGIV NVAAPAPLPN
AEFMRALRAA FGMPLGLPAS KRMLEIGAVF LRTETELILK SRRVVPTRLL DHGFKFRFPT
WSDAAGHLCR QWLLTRSQQK RLARRTPAGG NEFNCVRSGR SLRIP