Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0618 |
Symbol | |
ID | 4070113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 753903 |
End bp | 756371 |
Gene Length | 2469 bp |
Protein Length | 822 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637982623 |
Product | ABC efflux pump, inner membrane subunit |
Protein accession | YP_589697 |
Protein GI | 94967649 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATACGC TGTTGCAGGA TCTCCGCTTT GCGTCGCGGC AATTGCGCAA GAACCCTGGT TTCGCCATCA CCACCATCCT CACGCTTGCG CTCGGCATTG GTGCCGCCAC GGCGATCTTC AGCCTGGTAA ACGCCGTGCT TCTGCGGCCG CTGCCGTTCC CCGAGCAGGA CAAAATTGTG TGGACGGCGA TGGCGCACAC GCCGCGCAAC GCCAAGACTG CCGATGCCGC TCTCGTGCCC GGCTCCATGA GCTATCCCGA CTACTTCGAC CTGCGCAAGG GCAATAAGAC GCTCCAGTAC CTGTCCTCTT ATCACGACAG CAGCTTCTCC GTCACCGGCC GTGGTGATGC CCGCCATGTG GACGGATTCA CGGTGAGCGC CGACTTCTTC CGCACTCTCG GTGTGCATCC CGAACGCGGC CGCGATTTCC TCGCCGACGA TGAAAAACCC GGTGTGCACG TCGCCATGCT TGGCCACTCG CTGTGGCAGA GCACCTTCGG ATCGGATCCC GACATCATTG GCAAGAACAT CACGATCGGT GGACTTTCCT ATACCGTCGC CGGCGTGATG CCCGCGGACT TCAACTTCCC CGTGCAGAAT CCTGCCGCGC AGCTCTGGAC GACCCTCGCC GATGATGCCC TCGATTCCAC CGGCGACCAC CCGGTTACCG TGCAGCGTGG CGCACACTTT CTTTCGATGG TCGGAAGGCT GAAGCCCGGC GTCTCCACCG AGCAGGCACA GGCTGATCTC ACGGTGATCG TGAAGAACCT CGCGGCGCAA TATCCCGACA CCAATTCCCA TTTCCTCGGC GCCTTCGTAA AGCCGCAGCT CGAACAAATG ATCGGCGATA CGCGCGGGCC ATTGCGAATG CTCTTCGCCG CCGTGATCTT CGTATTGCTC ATCGCCTGCG CCAACGTTGC GGGCTTACTG CTCGCCCGTG CTTCGCGCCG ACGCTCTGAA ATAGCAGTGC GCTCGGCACT TGGCGCCACA CGGATGCAGA TCGTGCGCCA GGTCATGGTG GAATCAGTCT TCATCGGTAT CTGCGGCGGC ATCGCCGGAC TCCTTCTCTC CATGGCGTTA CTCCGCCTGC TGCTGCGCTT CGTGCCCTCC GATATTCCAC GCCTCGATTC GGTCGGCACC GACTATCGCG TTTTCGCATT TGCGATCGTG ATCTCGGTGA TCACGGGCGT ACTCTTCGGG GTGCTTCCCG CGATGCGTAT CTCGCGTCTC GATCCTTCAG CCTCACTGCG CGACGGTACC CGCACTTCGA GCGCCGGGCG CCAGCAGCAT CATCTGCACG GAGCACTCGT CATCGCGGAA ACCGCGATCG GTCTGGTGCT GCTCGTCGGT TCAGGCCTGC TCATTCGCAG TTTTGTGCGG GTGATGCATG TCGATCCCGG CTTCGATGCA CGCCATGTGT TGCTCGCCAG CGTGGACCTT CCCGACAATC GCTACCCGGG GGATAAAAAC GTAAGTTTTT TTCAGCAGTT GATCCCGCGG CTGCAAGCCT TGCCCGGGGT CCAGTCAGTT GCAGCAGGGT GGCCGCTCCC GTTGACCGGA AGCATGATGA GCATATCGTT CGAGATCGAA GGTCATCCTG TCCCCAAAGC CGACGAGCCG TCCGAGATCG TCAGCATCGC AACGCCCGGC TTCTTCAAAA CAATCGGTAT CCCAGTTAAG CGCGGACGCG AGTTCCTCGA GACCGACACG CGCACGTCGA CCAAAGTCAT CATCCTCACC GAGAGCTTCG CCAAGAAGTA TTTTCCCAAC GAAGACCCAA TCGGCAAGCA TGTGAAGCCC GGGCTCGGCG ATGGTTACAC CGACAGCGTG TGGCGTGAAG TTGTCGGCGT GGTCGGCGAC ATCAAGCGCC AGGGCCTCAC CGTCGAAACT CGACCCGAGT ACTACCTGCC GCATACGCAG GCCATCGTGG GCCCGCCGAT CTTCGTCATC CGAACCTCCG GCGATCCCAC GCAGATTACC AATGCCGTGC GCTCCGAAGT CGCGGCCATG GACCGCAACG TGCCCGTCTA CGACGTGCAT ACTTACGACG ACCTTATTTC GAAGAATGCC TCGCAGCCGC GCTTCCAGTC CATGTTGCTG ACCTGCTTCG CCGCGCTCGC GCTCCTGCTC TCCGCCATCG GTCTTTACGC CGTGCTCAGC TACATGGTGG CGCAACGCAC ACTTGAGATC GGTGTCCGCA TGGCGCTCGG TGCGCGTCGC CGTGATGTAG TGAACCTCAT TTTGAAACAC GGCTTGGGCT TAGCACTGGT AGGACTTGTG CTCGGCATGG GACTCTCGCT GGTGTTGACG CGCTACTTGA GCAGCATGCT CTACACCATC AAGCCGCTCG ATCCGGTCAC GCTCCTCACT GTCACAGGAA TTTTGCTTGT GGTCGCCGTC GTTGCCAGCA CCGCGCCCGC GTGGCGCGCC GCTCGCCTCG ACCCGATGAA GACCTTGCGC GACCAATAG
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Protein sequence | MHTLLQDLRF ASRQLRKNPG FAITTILTLA LGIGAATAIF SLVNAVLLRP LPFPEQDKIV WTAMAHTPRN AKTADAALVP GSMSYPDYFD LRKGNKTLQY LSSYHDSSFS VTGRGDARHV DGFTVSADFF RTLGVHPERG RDFLADDEKP GVHVAMLGHS LWQSTFGSDP DIIGKNITIG GLSYTVAGVM PADFNFPVQN PAAQLWTTLA DDALDSTGDH PVTVQRGAHF LSMVGRLKPG VSTEQAQADL TVIVKNLAAQ YPDTNSHFLG AFVKPQLEQM IGDTRGPLRM LFAAVIFVLL IACANVAGLL LARASRRRSE IAVRSALGAT RMQIVRQVMV ESVFIGICGG IAGLLLSMAL LRLLLRFVPS DIPRLDSVGT DYRVFAFAIV ISVITGVLFG VLPAMRISRL DPSASLRDGT RTSSAGRQQH HLHGALVIAE TAIGLVLLVG SGLLIRSFVR VMHVDPGFDA RHVLLASVDL PDNRYPGDKN VSFFQQLIPR LQALPGVQSV AAGWPLPLTG SMMSISFEIE GHPVPKADEP SEIVSIATPG FFKTIGIPVK RGREFLETDT RTSTKVIILT ESFAKKYFPN EDPIGKHVKP GLGDGYTDSV WREVVGVVGD IKRQGLTVET RPEYYLPHTQ AIVGPPIFVI RTSGDPTQIT NAVRSEVAAM DRNVPVYDVH TYDDLISKNA SQPRFQSMLL TCFAALALLL SAIGLYAVLS YMVAQRTLEI GVRMALGARR RDVVNLILKH GLGLALVGLV LGMGLSLVLT RYLSSMLYTI KPLDPVTLLT VTGILLVVAV VASTAPAWRA ARLDPMKTLR DQ
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