| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0616 |
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| Symbol | |
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| ID | 4070111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 750751 |
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| End bp | 753339 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637982621 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_589695 |
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| Protein GI | 94967647 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTT TTTACCGCCA TCAAAACGAA GCAGAGTTCG ATCTTGAACT CAAGTTCCAC
GTCGACGAAC GTACGCGTGA GCTCGTAGCG CAAGGCCTCT CTCAGGATGA GGCGCACCGA
CGGGCGATGA TCGAACTGGG CGGCAAGGAA CAGACGGCGC AGCAACTGCG AGAAGTGCAC
AGCAGCGCTT TGCTGGAGAC CATCGTTCGC AATTTCAGAT CGGGACTTCG GTTGATCCGC
AGAGCGCCAG GCTTCTCGCT CACCGTCGTC GTTACGCTTG CACTCGCGAT CGGCGCCAAT
AGCGCGGTAT TTTCCGCCAT CAATGCGATA CTGCTCAGCC CGCTTCCCTA TCCCAACGGC
GACCGACTGA TGCTCCTCCA GCAGAAGATG ACCAACATGC ACCACCCGGT CACCTTCGTG
TCTCCCGCGC GGCTCGAAGA CTGGAATCGC ATGAATGCAA CGTTCGAAGC CATGACCGGG
TACTATACCG AGCCGGGTTC CGAATTGTCC GGCAGCCTGC CTGAGAAAGT CATGCGCGCG
TTCGTTGCGC CACGATTCAT TCAGGTCTTC GGTGTCGCTC CCGCGCTTGG GCGGGACTTT
ACCTCCGAGG AGTTCAAGTA CGGCGGCCCC GACGCAGTCA TTCTCTCGGA CAGCTATTGG
CGGCGCCATT TTCACGCGGA CCCCTCTGTC ATCGGCAAGC GACTCCATAT CGGCAGCACC
GCCCCCACCG TCGTCGGTGT AATGCCGCAA TCGTTTCTCT TCCCTGTCCG CGACGCCGAC
ATTTTCATCC CCTCCCCGCC CGACTTCACC TATGCGCAGA GCCGCGATGC CACTTGGTTC
ACCGTGATTG GACGCATGAA ACCCGGAGTC GCCGTAACCC AGGCCCGCGC CGATCTCGCC
ACAGTCCAGG CACAACTCGG GCGTCAGTTC CCGAACCCCG ATGCAACCAT TGCCGTCATC
CTGAATCCCC TGAAGGAAGA TACTGTCAGC TCTGCACGGC GTTCGTTGTG GATGATCTTC
GGGTCCGTCA GCTTGCTCCT GCTTATCGCC TGCACAAACA TCGTGGCCCT CTTCCTCGCT
CGCACCAGCG ATCGCGAGCA CGAGATATCG GTCCGCTTCT CCCTCGGCGC GTCGCGTGCA
CGGATCGTGG CACAACTGCT CAGCGAAACC TTCGTGCTCG CCTGCATCGG TTCGGCTATC
GGCTTGCTGT TGGCTACCGC TTCCGCGAGA GTCTTCCATC TGCTCGCGGC GAGTTTGCCG
CGCGTGGATG AGATCGCCCT CAATTGGCGA ATCGTGGGCT ACACCTTTGT CTGTGCGATT
GTGGTCACGT TGCTTTGCGG TACTGTGCCT GCGTTACGGG CCACCCGCGG GCTGTCCGCA
GCCCTCGCAG CCTCCGACCG CCGTACCAGC GTCGCGGCGC GCCAGCCGTT GCAATGGACG
CTCGTCGCTG TGCAGGTTGC CCTTGCCGTA ACCTTGCTCT TCGGCGCTGG CCTGCTGCTG
CGCAGCTTTC AGGCGCTAAC GCGTGTAGAC GCCGGTTTCG ATCCCTCGCA CGTCCTCACG
CTTCATATTA GTGGAGGCTA CGGCGAAACC GTGGACATGA AAGCCATGGC TCGTCGCATT
GATCACGACC TCGACGGCAT CCGAGCCGTC CCTGGTGTCG AGGGCGCGGC CACGAGTTCT
TCCATGCCCG GCGTCCCCGA CGACCACAAA AGCGATGTTC GTATTCTCGA GGGACCGCAA
GACCCCGATC ATCCCACGCT CGCTACCAAT CGCTTCGTCT CGGACGGTTA CTTCGCCACC
ATGCGCATCC CGGTACTCGC TGGCACACCG TGCGAACAGG GCAAGGACAC TAAGGACGTC
CTCGTGAATC GCAGCTTCGC CGATCGCTAC ATGAGCGGCA CGACGCCCAT GGGCCATCAC
CTTCAGTTCG GAGTGAACCA CGCCATCGCG CTCACCGGAA TGGTCCGCGG CGTCGTGGCC
GACACGCGTG AGAACGGGTT GAATATGGAT GCGCAGCCAA CCGTGTACTG GTGCATCGCC
GCACCCGATC CCGATCCCGA ATTCCTCATC CGCACCCATT CCGATCCAAT GGCGCTCTCC
CAGACCATCC GCCGTGCGCT TGGAAACATT GAGCCAAACC GCGCCGTCTT CGACATCAGC
ACTCTCGAAG ATCACCTCAG CGACGCCTAC TCCGAGAACC GCTTGCGTAC CATCCTGCTG
AGTCTCTTCG CACTCACTGC AGTTTCTCTC GCATGCGTGG GGCTGTATGG CACCTTGAGC
TACTCGGTTA CGGTACGCCG GCGCGAGATC GGCCTTCGCC TCGCGCTGGG CGCGGTCCGC
GGACAAATCA CCAAGCGATA CGTCTGGCAA GCCTTGCGGG TTACCATGAT CGGCTGCACC
TGCGGCCTGG TGCTCGCGGC TTTTGCTGGG CGCATACTCC GCGGCATGCT CTTTGGTGTC
TCGGCCCTCG ATGCCGTGAC GTTCGCCGGC GTAATTGCAC TCGTGCTCGG CGTTGCAGCA
CTTGCCGCGA TCGTTCCAGC ATGGCGTGCC TCGCGAACCG ATCCAATGCA CGTGCTGCGC
GAACAGTAG
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| Protein sequence | MSFFYRHQNE AEFDLELKFH VDERTRELVA QGLSQDEAHR RAMIELGGKE QTAQQLREVH
SSALLETIVR NFRSGLRLIR RAPGFSLTVV VTLALAIGAN SAVFSAINAI LLSPLPYPNG
DRLMLLQQKM TNMHHPVTFV SPARLEDWNR MNATFEAMTG YYTEPGSELS GSLPEKVMRA
FVAPRFIQVF GVAPALGRDF TSEEFKYGGP DAVILSDSYW RRHFHADPSV IGKRLHIGST
APTVVGVMPQ SFLFPVRDAD IFIPSPPDFT YAQSRDATWF TVIGRMKPGV AVTQARADLA
TVQAQLGRQF PNPDATIAVI LNPLKEDTVS SARRSLWMIF GSVSLLLLIA CTNIVALFLA
RTSDREHEIS VRFSLGASRA RIVAQLLSET FVLACIGSAI GLLLATASAR VFHLLAASLP
RVDEIALNWR IVGYTFVCAI VVTLLCGTVP ALRATRGLSA ALAASDRRTS VAARQPLQWT
LVAVQVALAV TLLFGAGLLL RSFQALTRVD AGFDPSHVLT LHISGGYGET VDMKAMARRI
DHDLDGIRAV PGVEGAATSS SMPGVPDDHK SDVRILEGPQ DPDHPTLATN RFVSDGYFAT
MRIPVLAGTP CEQGKDTKDV LVNRSFADRY MSGTTPMGHH LQFGVNHAIA LTGMVRGVVA
DTRENGLNMD AQPTVYWCIA APDPDPEFLI RTHSDPMALS QTIRRALGNI EPNRAVFDIS
TLEDHLSDAY SENRLRTILL SLFALTAVSL ACVGLYGTLS YSVTVRRREI GLRLALGAVR
GQITKRYVWQ ALRVTMIGCT CGLVLAAFAG RILRGMLFGV SALDAVTFAG VIALVLGVAA
LAAIVPAWRA SRTDPMHVLR EQ
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