Gene Acid345_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0612 
Symbol 
ID4070107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp746569 
End bp747744 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content55% 
IMG OID637982617 
Productbeta-lactamase 
Protein accessionYP_589691 
Protein GI94967643 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACAT TGCTTGTCTT TGCATCCTTG TTGGTTTCGG CAGGATTGTT TGCTGCCGAA 
CCCATCCACC GTCTCGATGG CGGCACCATC TCGCCGGAAC AGATTGATGC CACCGTCACG
CGCTTGATGA AAGCCGCGGA AGTTCCGGGC TTGGGCGTGG CTGTGATCGA CGATGGCAAG
GTCGTCTACC TGAAGGGCTA TGGATTTCGT GACGTGGAAA AGAAGCTGCC ATACACGCCT
GACACTGTCG CGTATGCTGC CTCGTTCACG AAGTCGGCAT TCGCGTACAT GGTGTTGCAA
CTGGTGGATG AGCGTTCGCT CGACTTGGAT CGGCCTGTTT ATGGGTATCT ACCGAAGCCG
CTACTGGAGT ATGACGACTA CAAAGATCTT GCCGGCGACG AGCGCTGGAA AAAGATCACT
GCTCGCATGC TGCTGAGCCA CACCAGTGGG CTGCCGAACC TGCGCAGGTT CGAGGACGAT
CAGAAAGTTC ACATTCACTT CGAGCCTGGT TCGCGTTACG CGTATTCGGG TGAAGGCCTC
AAGCTATTGC AACTCGTGAT CGAAACCATT GCCAAGCAGC CATTGCAACA ACTGATGGAG
AAACGCGTTT TCGAGCCGTT TGGCATGACG CGAACTTCGA TGGTTTGGAA CGCGGAGTTC
GAAGACAATT TTGCCAACGG CTACGATGAG AATGGACGAA ACCTCGGGCC CGATCGTAGG
AAGAGCGCAG GCGCGGCGGG GTCGATGGTG ACGACCATTC GTGACTTCAG CCGGTTCCTG
CAATTGGTAA TGCATGGCGA CCGGCTTTCG CCAAAGATGC ATTCCGAAAT GCTCAAAGCG
CAGGTTCGTA TTCATGCACA GCACGAGTTC CCGACGTTTG AGAACAAGGC GACGCACGCC
AATGACGCTA TCCGGTTGAG CTACGGTTTG GGTTGGGGTT TGTACTGGTC GCCGTATGGC
GAGGCCTTCT TCAAAGAGGG TCACGACGAC GGCTGGCGCA ACTACACAGT GGCCTTTTCC
GACTCCGGCA AGGGCATGAT CATTATGACG AACAGCGGGA ATGGTGAAGG AATCTTCAAG
GAGCTACTTG AAGCGGTCCT GAAGGACTCT TTTACGCCGA TCGAGTGGGA GGGCTACACA
CCGTATCAGC AACTGCCACC GCGGCAGTCG AAATAG
 
Protein sequence
MRTLLVFASL LVSAGLFAAE PIHRLDGGTI SPEQIDATVT RLMKAAEVPG LGVAVIDDGK 
VVYLKGYGFR DVEKKLPYTP DTVAYAASFT KSAFAYMVLQ LVDERSLDLD RPVYGYLPKP
LLEYDDYKDL AGDERWKKIT ARMLLSHTSG LPNLRRFEDD QKVHIHFEPG SRYAYSGEGL
KLLQLVIETI AKQPLQQLME KRVFEPFGMT RTSMVWNAEF EDNFANGYDE NGRNLGPDRR
KSAGAAGSMV TTIRDFSRFL QLVMHGDRLS PKMHSEMLKA QVRIHAQHEF PTFENKATHA
NDAIRLSYGL GWGLYWSPYG EAFFKEGHDD GWRNYTVAFS DSGKGMIIMT NSGNGEGIFK
ELLEAVLKDS FTPIEWEGYT PYQQLPPRQS K