| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0597 |
|---|
| Symbol | |
|---|
| ID | 4069630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 726181 |
|---|
| End bp | 726801 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637982602 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_589676 |
|---|
| Protein GI | 94967628 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5340] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGG CAAAGTTCGT GACGGAGAAA TCCCGCGAAG CCGCTGTCCT CGAACTCGAT
CAGGTCGCTG CGGAAGTCGG CGTCGATGTC GATGTGGCGC GACAAGGCTT GCTGCGCCAG
GAGCAGCGCG GCTTGGTTGA GCACCTCGGA AAAGGTATTT TCTTGATCCG AACTTCGCGC
GACACTTCGG GAAGAGAACT CATCAACCAG TTTCGGCCCG ATGCCTACCT GTCTCTCGAA
AGCGTGCTAC GAGAATCCGG TGTCTCCACC CAGTCGCCGA AATATCTGAC GTGCATCACT
ACTGGCAGAC GTGGCGAATT TCGTTCCAAG TCCTTCGCAG TCGTCTACAA ACATATCTCC
CCGAAACTCT TCTGGGGTTT CCACGAAAAG CGCACCCTCT ACGGCTCATA CAAAGTCGCC
AATCCCGAGA AAGCCATCCT CGACTGGATC TACCTCGCAC GCCAAAACGG CCAGCCCGCC
GACACCGACG AATTCGAAAT CTCCCAGATT GATCGCGGCA AGCTGCTCGA CTACTCTCTG
AAATATCCCA AGCCCGTCCA GCAGCAGATC AAGGACTTGC TCGCCGACTT CGCTGCCGGC
CGTTCCGGTT CCCCCACCTA A
|
|---|
| Protein sequence | MDWAKFVTEK SREAAVLELD QVAAEVGVDV DVARQGLLRQ EQRGLVEHLG KGIFLIRTSR
DTSGRELINQ FRPDAYLSLE SVLRESGVST QSPKYLTCIT TGRRGEFRSK SFAVVYKHIS
PKLFWGFHEK RTLYGSYKVA NPEKAILDWI YLARQNGQPA DTDEFEISQI DRGKLLDYSL
KYPKPVQQQI KDLLADFAAG RSGSPT
|
|---|
| |