Gene Acid345_0595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0595 
Symbol 
ID4069628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp723330 
End bp724037 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content62% 
IMG OID637982600 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_589674 
Protein GI94967626 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTC ACCTACTCGC TTTTGCCCAA TCCGGCGAGC TCACCAGTCT CTTTAGCAAT 
ACTGGACTGG TCGCCCGCGC GGTCCTCCTT ATCCTCATGT TGTTCAGCTT GTTCTCGTGG
TCCATTGTCG TGGCGAAGTG GTCGCTGTTC CGCCGCGCCA AAGTCCAGAG TGGCCGTTTC
GTGCGTGCGT TCCGCAAAGC GCAGCGCATG CAGGACGTCG CTGCCGTGGC CGAGCAATTC
AAGCCGAGCC CGCTGGTGTC TGTCTTTGAA GGCGCTTACG AAGAGTTGCG CCGCCAGGGG
CCGCGCCTGA ACGTCACATC GATCCAGCGA TCGACGCAGA TCGCTGCCAG CGAAGAACTC
ACCCGCCTGG AACGCCGCTT GCCTTGGCTT GCAACGACGG GCGCGGTCAC GCCGTTCATC
GGGCTGTTCG GTACGGTGTG GGGCATCATT GATGCCTTCC ACGGTCTGGG TGACGCGGGC
GCTGCAACGT TGCGCGCCGT CGCACCGGGT ATTTCGGAAG CGTTGATTAC GACTGCCGCG
GGCTTGTTTG CAGCAGTTCC GGCCGTAATC TTCTACAACA TGTACATGAA CAACATCCGC
GAGTTTGGCG CGCGCATGGA CGACTTCAGT CTCGAACTGC TCAACACGGT GGAGCGCGGC
TCGAACGCGC CGGCGCCGCA ACGCGGTGTC GAGGTGGTGG AGCGCTAG
 
Protein sequence
MAIHLLAFAQ SGELTSLFSN TGLVARAVLL ILMLFSLFSW SIVVAKWSLF RRAKVQSGRF 
VRAFRKAQRM QDVAAVAEQF KPSPLVSVFE GAYEELRRQG PRLNVTSIQR STQIAASEEL
TRLERRLPWL ATTGAVTPFI GLFGTVWGII DAFHGLGDAG AATLRAVAPG ISEALITTAA
GLFAAVPAVI FYNMYMNNIR EFGARMDDFS LELLNTVERG SNAPAPQRGV EVVER