Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0579 |
Symbol | |
ID | 4068938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 708066 |
End bp | 709859 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637982584 |
Product | Beta-glucuronidase |
Protein accession | YP_589658 |
Protein GI | 94967610 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.588322 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACCA CTCACCGCAC TCAACGCCGC TCCGTGCTCA TCGTTCTAGT TCTTTTCGCC GCCGCGGCAA CTGCATTTGC ACAAACGCCT CTCATCGCCA ACATCCACGC GCGCCAGATC ACCGATCTCT CCGGCACCTG GAGCACCATC ATTGACGCCT ACCACGTCGG CGAGCGCAAT CGCTTCTACG AAGATCGACA CCAAACCGAT CCTTCTGAGC TCATCGAATA CAACTTCGAT CACTCTCCGA CTTTGAAAGT CCCCGGAGAT TGGAACTCTC AACGCCCTGA GCTGTTTCTG TACGAGGGCA CGCTCTGGTA TCGGCGAATC TTCTCCTACC ATCCAGCGCA GGGAAAGCGT CAGTTCGTTT ACTTTGGCGC CGCGAATTAT CACGCGACCG TCTATCTCAA CGCGCAGAAG CTTGGCGAAC ACAGCGGCGG CTACACGCCA TTCAATTTCG AAGTCACCGG CAAACTAAAA GACGGCGAAA ACTTGCTCGT CGTGGAAGTG GATGATCGTC GCAGCAAGGA CGCCATTCCC GCGCTCAATA CCGATTGGTG GAACTACGGC GGCCTCACCC GCGAAGTCTC CCTCGTAGAA GTACCGAGTG CGTTCATCGA GAATTACTTC ATCCAGTTGG CGAAAGGTTC GCCGAACGAG ATCGCCGGCT GGGTGCAACT CAACAGCGCC GCCGGGGGAT CCGAGGTAAC GATCGAGATT CCCGAAGCCA AGCTCCGCCA GAGCGCCAAG GCAGATGAGC ACGGCCGCGC AGCCTTCCGC TTCCCCGCGC AACTGACGCC GTGGTCGCCC GACAATCCCA AGCTCTACGA AGTTCGCATC TCATCCGGCA CAGACCATCT GACCGACCAG ATTGGCTTCC GCACCATCGA AGCCCGCGGC ACTAAGCTCT ACCTCAATGG CAAGCCGATC TTCCTGCGCG GCATCTCGAT CCACGAAGAA GCGCCCTTCC GCGGCGGACG CGCCTTCGCA TCCGAAGACG ACAAAACGCT CCTCGGCTGG GCGAAAGAAC TCGGCTGCAA TTACGTGCGA CTCGCCCACT ACCCGCACCA CGAGAGCATG GTGCGCGAAG CCGAACGTAT GGGCATCCTC GTCTGGTCCG AGATCCCCGT TTACTGGGAC ATTGACTGGA AAAACCCCGA CTCCCTCGCG CAGGCCCGCC AGCAACTTCA CGAAGAGATC GCCCGCGACC AGAATCGTGC AGCGATTATT CTCTGGTCTA TCGCCAACGA AACTCCCATT GATCCCGACC GTCTTGAGTT CCTGAAAGCC CTGGCCTCCG ACGTTCGCTC GCTCGACAAC ACTCGCCTGC TGACCGCCGC CCTCAATCGC ACCGGACGCG AAGGTAAAAC CCGCCTCATC GACGACCCGC TCGGCGCCGT TGTGGACGTG CTTGCGATCA ACGAGTACAT CGGCTGGTAT GAAAGCCGGG TCGAAGATGC CGACACTACT GAATGGAAAT CCTCGTGGGA GAAGCCGCTG CTGTTCAGCG AATTTGGCGG CGGCGCGCCC TATGGACGTC ACGGCGCAAC TAACGAACGT TGGACCGAGG AGTACCAGGC AAACCTCTAC CGCCATCAGC TGACCATGCT GCGCAAGATT CCCGCCCTCG CCGGACTCTC GCCGTGGGTG CTCATGGACT TCCACTCGCC CGTGCGCCTG CTGCCCGGCG TGCAGGACAT GCGCAACCGC AAAGGCCTCG TCTCCGACCA GGGCCAGCGC AAGCAAGCCT TCTACGTGTT ACAGGAGTAC TACCGCGAAA TGGGTGCGCA CTAG
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Protein sequence | MPTTHRTQRR SVLIVLVLFA AAATAFAQTP LIANIHARQI TDLSGTWSTI IDAYHVGERN RFYEDRHQTD PSELIEYNFD HSPTLKVPGD WNSQRPELFL YEGTLWYRRI FSYHPAQGKR QFVYFGAANY HATVYLNAQK LGEHSGGYTP FNFEVTGKLK DGENLLVVEV DDRRSKDAIP ALNTDWWNYG GLTREVSLVE VPSAFIENYF IQLAKGSPNE IAGWVQLNSA AGGSEVTIEI PEAKLRQSAK ADEHGRAAFR FPAQLTPWSP DNPKLYEVRI SSGTDHLTDQ IGFRTIEARG TKLYLNGKPI FLRGISIHEE APFRGGRAFA SEDDKTLLGW AKELGCNYVR LAHYPHHESM VREAERMGIL VWSEIPVYWD IDWKNPDSLA QARQQLHEEI ARDQNRAAII LWSIANETPI DPDRLEFLKA LASDVRSLDN TRLLTAALNR TGREGKTRLI DDPLGAVVDV LAINEYIGWY ESRVEDADTT EWKSSWEKPL LFSEFGGGAP YGRHGATNER WTEEYQANLY RHQLTMLRKI PALAGLSPWV LMDFHSPVRL LPGVQDMRNR KGLVSDQGQR KQAFYVLQEY YREMGAH
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