Gene Acid345_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0566 
Symbol 
ID4073055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp692983 
End bp694167 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content59% 
IMG OID637982571 
Producthypothetical protein 
Protein accessionYP_589645 
Protein GI94967597 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.182463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0679598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCC AACTTCGCGC TGGAATCCTC TTCCCGCCCT GTTTACCATG CTCCCATCTT 
GCTCGAAACG CAATTTGCCG CATCCAAACG AATGGAGAGC GAGTGATCGA TTTGCTGGAC
CGCCGCGCAG TCCGCGTACT GACCACCGTG CTGGTTTTTG CCGCTGTTTT GGCGTTCATT
TACGTTGCGC ACAAGACGCT CATTCTCTTT CTCTTCGCGC TTCTCTTCGC TTACTTGCTG
GAACCCGTCG TCAGCCGCCT TGCCGGATGG ATGCGCAACT CGCGCGGCCT CGCAATCCTC
ATTGTTTACG TTTTGCTCTT CGTCGCCGTG ACCATTGCCG GTGCACTGAT CGGGCCACGC
ATCTTCTCCG AAGGCCAAAA ACTTGGCCAG CAACTCCCGG ATCTCTACGA CAAAGTCGCC
TCTGGCAACA TCGCCTTCAC GCTCGGCTCC CGCCATGGCT GGAGCGCCGA AACATCCCAA
CGTCTGAAGA CTCTGCTCGT CAGCCACCAG GATGAAATCG TAAGCGCCAT CAGCAGCGCC
GGCACCCGGA CCGCCGCGAT GCTCACCAAC ATTGGCTGGA TCATCATCAT CCCCATCCTC
GGCGCATTCC TGCTTAAAGA TAAGCGTGAC CTGCGCCTCT CGCTGCAGAA CATCGTGGGC
GAGCCGCGCA AAAGAGAGTT TTTTGGTCAG CTCATCACTG ATGTTGACGC CATGCTCTCG
CAATTCGTCC GCGCCCAACT CCTGCTCGCC ATCATCTCCG GACTGGTCTA TACCGCGGCA
TTATCGGTGC TCCAGGTTCC TTATGCCTAC ATCCTCGGCG CCGTCGGCGG CCTTCTGGAG
TTTGTCCCGC TGGTCGGCCC CGCCATCGCG GCGGTGGGCA TCGTAGGTGT CTGCTTCGGC
ACCCCAAACT TCCACCACAC CCTCTGGGTC GTCGTCTTTC TCGGCGTCTG GCGCCTCCTT
CAGGACTATG TGATCTCCCC GCGCCTGCTC GGCGGCAAAG TCGAACTCCA CCCTCTGCTC
ACCATCTTCG GCGTTCTCGC TGGAGGCGAA GTCGCGGGTG TACTCGGGAT CTACCTCTCG
GTTCCTGTGA TGGCCACGAT CCGCATCCTA TTCATTCACT GGCATCGATA CCGCGCCAGC
GCCGAACTCG CGTCAGATAC CGCGCCCGTT CTCGTAGAAA AATAA
 
Protein sequence
MRTQLRAGIL FPPCLPCSHL ARNAICRIQT NGERVIDLLD RRAVRVLTTV LVFAAVLAFI 
YVAHKTLILF LFALLFAYLL EPVVSRLAGW MRNSRGLAIL IVYVLLFVAV TIAGALIGPR
IFSEGQKLGQ QLPDLYDKVA SGNIAFTLGS RHGWSAETSQ RLKTLLVSHQ DEIVSAISSA
GTRTAAMLTN IGWIIIIPIL GAFLLKDKRD LRLSLQNIVG EPRKREFFGQ LITDVDAMLS
QFVRAQLLLA IISGLVYTAA LSVLQVPYAY ILGAVGGLLE FVPLVGPAIA AVGIVGVCFG
TPNFHHTLWV VVFLGVWRLL QDYVISPRLL GGKVELHPLL TIFGVLAGGE VAGVLGIYLS
VPVMATIRIL FIHWHRYRAS AELASDTAPV LVEK