| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0549 |
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| Symbol | |
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| ID | 4070007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 677608 |
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| End bp | 679524 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637982554 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_589628 |
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| Protein GI | 94967580 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.357331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.13799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATTC GTAGCTTCTG GTCGCTGTGC CTGCTGGGCG CAATGATCAT CACCACGGCG
TGCGAGACCG ACAACCCGAA GAAGGCTGCT ACCACTCCAC CTCCGCAGGC GACGGCACCT
ACACTGGCGA CACCGCAGAG CGATGCGGCA CCGGCAACTG CGCCGGTAGC GACTGCCGCG
CCTGCGGGAG ATTCAGTCAC AGAGCTGATC GCGAAGGCCG AGAAGGAGTT CAAGGCCGGG
CAGTCGAATT ACGCTGCCGG GCATCTTGAA GCCGCGAAGG ACAATTTCGA CCAGGCCTTC
AAGACGATGT TGTCGAGCAA TCTCGATGTG CATTCGGATG AGCGGCTCGA GAACGAGTTC
GACAAGATTG TGGAGTCCGT CCACGAGCTT GAGTTGCAGG CGCTGAAAGA GGGTGACGGC
TTCACCGAAC AGAAGTCGGA ACCGGCCCCG ATTGACGAGG CCAACGAAGT CACCTTCCCG
GTTGATCCCA ACATCAAGGC GCAGGCATTG GCGGAGATCC GGCAGACGCG TTCCGATTTG
CCGCTGGTAA TGAACGACCA GATCGCGGGT TACATCTCGT ACTTCTCTTC GCGCGCGAAG
GGCACGCTGG CGAATGGGAT GGCGCGCTCG GGAATGTATC GCGAGATGAT CCAGCGCGTG
TTGAAAGAAG AAGGCGTGCC GCAGGATTTG ATCTATCTCG CGCAGGCGGA GTCGGGGTTC
CGGCCGCTGG CGCTCTCACG CGCGGGAGCT CGCGGAATGT GGCAGTTCAT GGCTTCACGC
GGGGGCCAAT ACGGACTGGA TCGCAACTGG TGGGTGGATG ATCGCCAGGA TCCGGAAAAA
GCCACGCGCG CAGCGGCACG GCATTTGAAA GATCTCTACC ACATGTTCGG CGACTGGTAT
CTCGCGATGG CTGCGTATAA CAGCGGTCCG CTGACGGTAC AACGCGCGGT ACAACGCACG
GGCTACGCGG ACTTCTGGGA GTTGTATAAG CGCGGCGTGC TGCCGGGTGA GACCAAGAAC
TATGTGCCGA TCATCATCGC GATCACGATC ATGTCGAAGA ACCCGGCGCA GTATGGGCTC
ACCGAGGTGC AGTTCGATGC GGCGATCCAG GGCGATTCGG TGACGATTGA TTATCCGGTG
GATTTGCGAC TGGTCGCGGA ATGCGTGGAC GGTTCGGTGA GCACGTTGCA GGAACTGAAT
CCGAGCCTGT TGCGCATGAC CACGCCGAAA GACCAATCGT TCACACTGCA CGTGCCGACG
GGGACGAAAG ACAAGTTCGA GCAGAACATC GCAGCGATCC CGCTGGAGAA GCGCGTGCTG
TGGCGCTTCC ATCGCGTGCA GCCCGGAGAC ACGCTGGCGT CGATCGCGCA CAAGTATCAC
GTGAGCAGCG ATGCCATCGC GGAAGCGAAC GATCTTCCTG ATGAAGAAGT ACGCACCGAT
GCCAAGCTGA TTATTCCGGT GGCATCGAGC AAAGGTTCGC AGAGCGCGTC GAATGAAGGC
GGCGGATATT CGAAGAAGCC GGTGTCGTAC AAAGTGCGTA AGGGCGACAC GATTGCTTCG
ATCGCGGATG ACTTCGGAGT TCCTGCCGAC AAGATTCGAC GGTGGAACCA CATCAGCGGC
GACTCGGTGA AACAAGGTCG CGTGTTGCAC ATCTACAAGC CGACAGGCGA TGAAGAAGAG
GCGAGTTCGA CGCGTTCACG CTCGTCGTCA AAGAAAGCTG CGCCGGAGTT GTCGAGCAAA
TCACAGGCGA AATCGAGTGA CGAAAAAAAG CAGAGCGCGA TGCATCACAC CGTGAAACGT
GGTGAGACTC TGAGCAGCAT CGCGAACCAA TACAACACCA CGGTTGCGGA GTTGAAGAAG
TACAATCCCA ACACTTCGAA GCTGCGCCCG GGCGATGTAC TAGTGATCAG ACGATAA
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| Protein sequence | MRIRSFWSLC LLGAMIITTA CETDNPKKAA TTPPPQATAP TLATPQSDAA PATAPVATAA
PAGDSVTELI AKAEKEFKAG QSNYAAGHLE AAKDNFDQAF KTMLSSNLDV HSDERLENEF
DKIVESVHEL ELQALKEGDG FTEQKSEPAP IDEANEVTFP VDPNIKAQAL AEIRQTRSDL
PLVMNDQIAG YISYFSSRAK GTLANGMARS GMYREMIQRV LKEEGVPQDL IYLAQAESGF
RPLALSRAGA RGMWQFMASR GGQYGLDRNW WVDDRQDPEK ATRAAARHLK DLYHMFGDWY
LAMAAYNSGP LTVQRAVQRT GYADFWELYK RGVLPGETKN YVPIIIAITI MSKNPAQYGL
TEVQFDAAIQ GDSVTIDYPV DLRLVAECVD GSVSTLQELN PSLLRMTTPK DQSFTLHVPT
GTKDKFEQNI AAIPLEKRVL WRFHRVQPGD TLASIAHKYH VSSDAIAEAN DLPDEEVRTD
AKLIIPVASS KGSQSASNEG GGYSKKPVSY KVRKGDTIAS IADDFGVPAD KIRRWNHISG
DSVKQGRVLH IYKPTGDEEE ASSTRSRSSS KKAAPELSSK SQAKSSDEKK QSAMHHTVKR
GETLSSIANQ YNTTVAELKK YNPNTSKLRP GDVLVIRR
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