| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0507 |
|---|
| Symbol | |
|---|
| ID | 4069407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 623407 |
|---|
| End bp | 624843 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637982512 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_589586 |
|---|
| Protein GI | 94967538 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.699413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGATCGA GCGCAAGACA GCTCGGACGG TACGTTGTCG TCGTACTCGT CCTCGTCGCA
GTCGTTTTCA TATATCGCCA CGTTCCGGCT AATCCCACCA CCGTCGCCCT CACGTTTCTC
ATCTTGGTTT TGCTTACCGC GGCGTTCTGG GGATTTAGGG TCGCGATGGC TCTCTCGGTG
CTCGCAACCG CGGCAATCAA TTTCTTCTTC CTGCCGCCAG TCGGCACCTT CACTATCGCC
GATCCACAGA ACTGGATCGC GCTTCTCGCC TTCCTTGTTA CCGCAGTCGT CGCTAGCAAT
CTCGCGGAAC GCGCACGCAA TGAAGCTGAG AAAGCTACAG AGCAACGCCA AAACGTCGAG
CATCTCTACG ACCTGAGCCA GAAATTGTTG ACGGTTGAAA CCGTTCCGGA ACTGATGAAT
GCGATACCGG TGTTCGTTCT CGAATCGTTT GGCGGCTCAG GGGTCGCGCT TATTTCAAAC
GTAAAGCCAA CTATTTACCG CTCGACTGCC GACGTCTCGA TTGACGCGGA AACCCTGAGA
AACACTCTTG CCCGCGGCGA AAGCACCCAA CAAAACGGCG TGAATTACTT CCCGGTGCGG
CTTGGCGTGC GCTCGGTTGG CGCGCTGGCA ATTAAGGGAT TGGAGATTCC GCGGCAAACC
GCGGACGCAA TTGGCAGTCT GGTCGGCACC GCCATCGAAC GCACTCGCGC CGTGGACGAA
CTGGCAACCA GCCGTGCCGC ACGCGAGAGC GAACAACTGC GCTCTGCGCT ACTCGACTCA
GTAACACATG AGTTCCGCAC GCCACTTACC AGCATCAAGG CGAGTGTAAC GACGCTGCTC
GAGGGTTCTC TCGCGGACGC CGCTGCGCGC GCGGAATTGC TGACGATCAT CAACGAAGAA
ACAGACCGGC TGAACCGATT GGTTGGCGAA GCTGCGGAAA TGGCGCGTCT CGATTCGCGA
GTGATCACCC TGCAACGACG GCAATTTGCG TTGAGCGAAG TTGTCGAGAC CGTCCTTGAT
GAGCAAATCT CTACACTACG CAAACATCCG GTCACCGTTG AATTGCCGAA AGGCTTGCCT
CCGGTGTATG CCGACTTCGA TCGCATCCGG CAGGTCCTTA CTCACTTGGT CGAGAACGCC
GCGAAATATT CGGAGAACGA CACACCCATT CGCATCAGCG CGGAATTAAA GGGCGACTTC
ATAGTGACCA GCGTGGCCGA TCGGGGACCG GGGATCGACA GCTTCGAGCA GACGCTCATC
TTCGACAAGT TCTATCGCGG AGAAAAACAG CGTTACGCCG CCGCCGGCAC GGGTATGGGT
CTGGCAATCA GTAAAGTGCT GATCGAAGCC CACGGCGGCA CATTGACTGT GGTGAGCCAG
ATCGGCCAGG GGTCCGTCTT CTCGTTCACC CTACCCATTT CGGGCGAGCG ATCGTAG
|
|---|
| Protein sequence | MRSSARQLGR YVVVVLVLVA VVFIYRHVPA NPTTVALTFL ILVLLTAAFW GFRVAMALSV
LATAAINFFF LPPVGTFTIA DPQNWIALLA FLVTAVVASN LAERARNEAE KATEQRQNVE
HLYDLSQKLL TVETVPELMN AIPVFVLESF GGSGVALISN VKPTIYRSTA DVSIDAETLR
NTLARGESTQ QNGVNYFPVR LGVRSVGALA IKGLEIPRQT ADAIGSLVGT AIERTRAVDE
LATSRAARES EQLRSALLDS VTHEFRTPLT SIKASVTTLL EGSLADAAAR AELLTIINEE
TDRLNRLVGE AAEMARLDSR VITLQRRQFA LSEVVETVLD EQISTLRKHP VTVELPKGLP
PVYADFDRIR QVLTHLVENA AKYSENDTPI RISAELKGDF IVTSVADRGP GIDSFEQTLI
FDKFYRGEKQ RYAAAGTGMG LAISKVLIEA HGGTLTVVSQ IGQGSVFSFT LPISGERS
|
|---|
| |