| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0448 |
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| Symbol | |
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| ID | 4071695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 529509 |
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| End bp | 530675 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637982452 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_589527 |
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| Protein GI | 94967479 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.192124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATTT TCAATCGAAC GTGGCAGCGA TTGGCGCCGG CGGCGATTCT TGCCGCGCTC
GCGCTCGTGC TGTCGAGTTG CCAGGGTGGC GGAGCGAAGA GCAGCAACAC TCGTGAGGGG
GGCAATCCCA CGAATCCAGA GCTGTTCACC GTTCCTAGCG ACCAACTATC CCACGTCCAG
ATCATCACCG TTGAACCGAC TGCGCTCACT CGCTCGCTAC GTTTAACAGG TGCGGTCGCG
TACAACAGCT TCCACACGAC CCCAGTGATC ACACAGGTAA GCGGCCCAGT GAGCCGAGTC
GTTGTGGTTC CCGGACAGAA CGTGCACCAG GGCGAACCGA TGCTCTATGT AGCGAGCCCG
GATTTTTCGC AGCTCCGCAC CAATTACCTG AAGGCGAAGG ATGCTTACGC GCTGTCGCAA
AAGGCATTTG CACGCGCGAA AGACCTCTAC GATCACCACG CCATCTCGGA ACAAAACCTG
GAGCAGGCGG AATCGGCAGA AGTGCAGGCG GGGGGTGACC TGGTTGCGGC GCAATCGGCT
CTCAAGGTGT TAGGCATTAC CGACCCGGAT GAGCTGGTCA GGACTGCGCC GACCTTCGAA
GTTCCAGTGA AGGCTCCTAT CAGCGGCTTG GTAGTGGAGC AAAACGTCGC TGTTGGACAA
CTCATCCAGC CGGGATCCAC ACAATGCTTC ACGATTTCCG ACGTAAGCAC CGTGTGGGTG
TTGGTAAATG TCTATCAAAA AGACTTGCCG TACGTGCGTG TCGGCGACAC GGTTGAGATC
CAGACCGATG CTTATCCCGA CGTGTTTCAC GGCCGCATCT CGTACATTGC AGCCTCGTTG
GATCCCAACA CGCGGACGTT GCAAGCTCGT ATCGAGACGA ACAATCCGGG CGGGAAATTG
AAGAAAGACA TGTACGTGAC AGCAACTGTC AATGCGGGCG AGATTAAGAA TGCACTGGTT
TTGCCTGATG CGGCGATTCT CCGAGATAAC GAGAATCAAC CATTCGTGTA TACCGAGACC
GCCTCGGAAC AGTTTGGCAG GCGACCGGTG ACGCTTGGCG AAAGCGTGAA TGGAAAAACT
GAAATCACCA GCGGCCTCAA AACCGGCGAC AAAGTTGTGG GGAACGGGAG CTTGTTCTTG
CAGTTTGCGA ACTCGCTGCA ACGCTAA
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| Protein sequence | MMIFNRTWQR LAPAAILAAL ALVLSSCQGG GAKSSNTREG GNPTNPELFT VPSDQLSHVQ
IITVEPTALT RSLRLTGAVA YNSFHTTPVI TQVSGPVSRV VVVPGQNVHQ GEPMLYVASP
DFSQLRTNYL KAKDAYALSQ KAFARAKDLY DHHAISEQNL EQAESAEVQA GGDLVAAQSA
LKVLGITDPD ELVRTAPTFE VPVKAPISGL VVEQNVAVGQ LIQPGSTQCF TISDVSTVWV
LVNVYQKDLP YVRVGDTVEI QTDAYPDVFH GRISYIAASL DPNTRTLQAR IETNNPGGKL
KKDMYVTATV NAGEIKNALV LPDAAILRDN ENQPFVYTET ASEQFGRRPV TLGESVNGKT
EITSGLKTGD KVVGNGSLFL QFANSLQR
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