Gene Acid345_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0422 
Symbol 
ID4069648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp489859 
End bp490581 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content59% 
IMG OID637982426 
ProductGntR family transcriptional regulator 
Protein accessionYP_589501 
Protein GI94967453 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0207613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0264294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGGG GCAGGCAATC CGAAATACCG GCGTATCAGA AGATCGAAGG AGCGCTTCTC 
GCGAGCATGG AAGCTGGCGA ACTTCAGCCA GGCGATGCCC TGCCCTCAGA GCGAGACCTG
GCGAAGCGTT ACGGTGTGAG TCTGATGACC GCCCGCCACG CTGTCCTGGC GCTTCAGAAT
GCCGGGAGGG TCCACCGCCG CCCGAGGGCA GGAACTTACG TTGCTCCTCC GAGGATCCAA
TTCAATCGGC TTAGCGGGCT GACCGAACAG TTGAGTGAGC ATGGGGTTCG AATGAGGTCG
AAGGTACTCA CATTCGAGTT CTGTGAAAAC GAGCCCCACG TGAATGCACA GCTCGTTCTG
CCGACGGATG CACGCGTGGT CAAGATTCAG CGCTTGAGAA TCGGCGGCGA AGAGCCCTTC
GCAATCGAAA CCTGCTACGT CTCCGCGGAG GCCTTTCCTG AGCTTCGCCG TGAACACGCC
GAGAAGAAGT CTCTGTTCGC GACCGTCGCC GAACAATACG GGCATCCGTT GAATTATGCC
GACGAAGAGA TTGATGCCAC CACTGCATCG GCACGGCAGG CAGTGCTGCT AGGAATTCGG
CGCGATGCTC CCCTGCTGAG AATCCGGCAA CTCATTCACG CGTCCGACGG CCTGCCGATC
ATTTACGGAC TAGGCTTCTA TCGTCCGGAA CTCCACACGG TATACGTGAG GCGGGTGCGC
TGA
 
Protein sequence
MRRGRQSEIP AYQKIEGALL ASMEAGELQP GDALPSERDL AKRYGVSLMT ARHAVLALQN 
AGRVHRRPRA GTYVAPPRIQ FNRLSGLTEQ LSEHGVRMRS KVLTFEFCEN EPHVNAQLVL
PTDARVVKIQ RLRIGGEEPF AIETCYVSAE AFPELRREHA EKKSLFATVA EQYGHPLNYA
DEEIDATTAS ARQAVLLGIR RDAPLLRIRQ LIHASDGLPI IYGLGFYRPE LHTVYVRRVR