| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0418 |
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| Symbol | |
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| ID | 4068737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 484250 |
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| End bp | 486673 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637982422 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_589497 |
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| Protein GI | 94967449 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0396229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCGC AGGAGATTCG TCACGGAGTT CGAATCCTAC AACGCAGTCC TGGTTTCGCA
TTCGCGACCG TTCTTACGCT AAGCATCTGC ATCGGCGTAA ACATTGCGAT GTTCTGGATC
GTGGATGGCG TTCTGCTGCG TCCGCTGCCT TATCGCGAGT CAGACCGCTT GGTAAACATT
ACGACCGGTA GCCCTGAACG GCAGATCACG GGAATTCCCA CTTCGTGGAC CAAGTTCCAG
CGCATGCAGC AAGAGTCGAA GCTCCTCGAG AGCGTCGGCG CCTATTTCCC CACTACTTTG
AGCATCAGCA CGAACGGTGT TCCTGAGGAA TTGCCTGCTG CGCATGCGAC GGCAAGTTTG
TTCCAAGCAC TCGATGTAAC TCCGGCGATG GGCCGCTCGT TTCTTCCGCA GGAAGAACGT
GAAGGCGGTG CACAGGTCGC AATAATCAGC GATCACTTCT GGCGGACCCG CTTCAATGCA
TCAAGCGACA TCCTCGGGAA AACGATCTCT CTCGACGGCC GTAGCGTCGA AGTAATTGGC
GTTCTCCCTC GCAGGTTTCA ATTTCCATTT GTGCAACCTG CGCCCGAGGT TTGGGTCCCA
CGGGTCTTCG AGTATCCAAC CGTTGCTCCG GCCCGGGTCC GCTCGGGCGC CGCGTTCCTC
AGCGTACATG GCCGGCTGAA ATCAGGCGCG ACGATAAAGC AGCTGCAATC TGAACTCAGC
ACTCTCGCGC GCGCTTATGA GGCGGACAAT CCCGGCTTCG CAGATGGGCG TGGCTTTACT
CTGGAAGTCG TCGCACTCAA GGAAAGCGTC GTTGGGCAGA TCCGCTCTAC GCTTCTAACG
CTGCTCATCG CCGTCGGATT CCTCTGGCTT GTCGGCTGCT CGAACATCGC GGGCCTGCTT
GTTGCTCGTG CCACTACGAG ACGAAAAGAG ATTGCGATTC GGCAGGCGAT CGGAGCGTCG
CGCTCGCGGA TTGCCACGCA GCTCGTCGCG GAGAGTCTGG TGCTCTCCTA TCTCGCCGGT
ATTTTTGGCG TGGTCATCGC GCTTGCCTGC GGCAAGGGTT TGCGAATGTT GCCGCCAGGG
ACGCTGCCTC GGGTGGAAGA GCTTGGGCTT GATCCCACCG TCGTCCTGTT CGCAATTCTT
TTAAGCACAT TCGCAACCGT CGTTATAGGC ATCATCCCTG CTGTGCAGAT ATACCGGCCC
GACATCTACA CACCGCTAAA AGAGGGAGGC CGCACCGCAA ATACCGGCCA AAAGGGAAGC
CGCTCACGCT TGGTGCTGGT TGTTGGTGAA GTCGCTGCAG CCATGGTTCT CCTCGCGGGA
GCGGGAATGC TCATCAAGAG CTTCGCCAAC CTTGCTCGCG TGCATCCCGG CTTCGACCCG
CAGAACGTGA TGACTTTCAC CATCAACCTT CCCACCTCGC ACTACAACAC GCCGGAAAAG
CAGAGAGAGT TTTACCGCGC ACTTCTCGAA GAGGCGCGTG CGATTCCCGG CGTCGATGCT
GCCGGCGTCA TCAGCGCATT GCCTATCGGT GGCTTTGGCT TCAGCGTGTA TGTGTGTCCC
GAAGGGACCG TATGCCAGGG CATCGGCAAA GATCCGGTAA TTGCCTATCG CATGGTGAGT
CCCGCCTATG TGAAAACCTT GCGCATCCCA CTGCTCGCTG GACGCGATTT CACGGACCAC
GACAACCTCA ACGGATCACT GGTCACGATC ATCAACCAAT CCACTGCGAA AAAGTATTTT
CCGAACGTCG ACCCCATCGG CCGTCATTTG GTTCCTTCCC GTGAGCGAAT CCCGCTCGAA
ATCGTGGGAG TCATCGGCGA TGTGCGGGCA AATGGTTTGG GAGCACCCGT AAGCGAGGAG
TTTTATGTCC CAGCCGCGCA GGCATCCGCG GCGACCATGA CTCTCGTCCT GCGGTCTCAC
ACCAACTTGT CCGCATTCGC CCCGCCGGTT CGTCGCATCA TGGCAAAGCT CGACCCCGAT
GTCCCTTTCG CGAATGTTGC GACGATGAAC CAGGTGATCT CCGACTCTGT AACCCAATCT
CGCCTTACCG CAATACTGAC TGGCGCATTC GCTTCGATCG CTCTCTTCCT CACCAGCGTC
GGCATTTACG GAGTGATCGC TTACTGGGTG GCCGAGCGTT CCTACGAAAT TGGGCTAAGG
CTCGCGGTGG GCGCGATGCG CAAGGACATT CTCACTCTGG TTCTAAAGCA AGGTATGAGC
CTGGTTGCTA TCGGCTTGGT GATTGGCTTA GCAGGATCCC TTCTGTTATC TCGATTCCTC
AAAGAGATCC TTTTCGGCAT CGGAACCTTC GACCCACGCA CATTGATCGA GACGGTCGTG
ATCTTAAGCG CGGTCGCCGT CCTGGCAGTT TTGATTCCGG CTCGCCGTGC ACTTTCAGTT
GATCCCATTA TTGTGCTGCG TTAA
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| Protein sequence | MLAQEIRHGV RILQRSPGFA FATVLTLSIC IGVNIAMFWI VDGVLLRPLP YRESDRLVNI
TTGSPERQIT GIPTSWTKFQ RMQQESKLLE SVGAYFPTTL SISTNGVPEE LPAAHATASL
FQALDVTPAM GRSFLPQEER EGGAQVAIIS DHFWRTRFNA SSDILGKTIS LDGRSVEVIG
VLPRRFQFPF VQPAPEVWVP RVFEYPTVAP ARVRSGAAFL SVHGRLKSGA TIKQLQSELS
TLARAYEADN PGFADGRGFT LEVVALKESV VGQIRSTLLT LLIAVGFLWL VGCSNIAGLL
VARATTRRKE IAIRQAIGAS RSRIATQLVA ESLVLSYLAG IFGVVIALAC GKGLRMLPPG
TLPRVEELGL DPTVVLFAIL LSTFATVVIG IIPAVQIYRP DIYTPLKEGG RTANTGQKGS
RSRLVLVVGE VAAAMVLLAG AGMLIKSFAN LARVHPGFDP QNVMTFTINL PTSHYNTPEK
QREFYRALLE EARAIPGVDA AGVISALPIG GFGFSVYVCP EGTVCQGIGK DPVIAYRMVS
PAYVKTLRIP LLAGRDFTDH DNLNGSLVTI INQSTAKKYF PNVDPIGRHL VPSRERIPLE
IVGVIGDVRA NGLGAPVSEE FYVPAAQASA ATMTLVLRSH TNLSAFAPPV RRIMAKLDPD
VPFANVATMN QVISDSVTQS RLTAILTGAF ASIALFLTSV GIYGVIAYWV AERSYEIGLR
LAVGAMRKDI LTLVLKQGMS LVAIGLVIGL AGSLLLSRFL KEILFGIGTF DPRTLIETVV
ILSAVAVLAV LIPARRALSV DPIIVLR
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