| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0393 |
|---|
| Symbol | |
|---|
| ID | 4069215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 451391 |
|---|
| End bp | 452083 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637982396 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_589472 |
|---|
| Protein GI | 94967424 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.010467 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.882414 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGACGA AATCGCTGAT GGCTTGCGCG CTGTGGATGG TGATGCTGAG CGGTGCGGCG
ATGGCGCAGC AGGCGAACGG GCTTGAGGGT GTGCTCGCCA GCATGGATAA GGCCTCCGCG
AACTTTAAAG CGATTGAGTG CTCCTTCAAC TGGGACCAGT TCACTAAGGT CGTGAACGAC
ACCGACACGC AGGCGGGGCA CATGTTCTTC CGGCGCTCGG GCGAGAGCAT CGAGATGGCG
GCGCACATCG AGAAGCCGGA TACGAAGATC GTGGTTTTCA GCAATGGCAT CGTGCGTATC
TACCAGCCGA AGATTGATAC CGAGCAGAGG ATTGATGCGG GGAAGAACCG CGCCGAGTTT
GAAAGCTTCC TGGTGCTGGG CTTTGGCGGG AGGGGACACG ACCTTAGCAA GAGCTTTGAC
GTGCAGTTTG GCGGGAATGA AACCGTTCAG GGTGTGACGA CGGCGAAGCT GGTCTTGACC
CCGAAAGAGG CGAAGGTCAA GAACATGTTC AACAGCATCA TCCTGTGGAT CGATCCGGCG
CGGGGGATTT CGATTCAGCA GCAGTTCATG CAGCCGTCGG GGGATTATCG GCTGGCGAAG
TACACAGATA TTAAGGTGAA CCAGAAGCTG CCGGATGATG CGTTCAAGAT CAACACGACG
CGGAAGACGA AAGTAGTTAC ACCGAACGGG TAG
|
|---|
| Protein sequence | MKTKSLMACA LWMVMLSGAA MAQQANGLEG VLASMDKASA NFKAIECSFN WDQFTKVVND
TDTQAGHMFF RRSGESIEMA AHIEKPDTKI VVFSNGIVRI YQPKIDTEQR IDAGKNRAEF
ESFLVLGFGG RGHDLSKSFD VQFGGNETVQ GVTTAKLVLT PKEAKVKNMF NSIILWIDPA
RGISIQQQFM QPSGDYRLAK YTDIKVNQKL PDDAFKINTT RKTKVVTPNG
|
|---|
| |