| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0370 |
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| Symbol | |
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| ID | 4068997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 413496 |
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| End bp | 415913 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637982373 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_589449 |
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| Protein GI | 94967401 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.701449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCG GCTTACTTCA AGATCTGCGA TATGCATGGC GCCAACTGCG CAAGAGCCCC
GGCTTTACCG CCGTCGCTGT GCTCACGCTG GCGCTCGGCA TCGGCGCGAA TGCCGTGGTA
CTGGCGGCCG TGCAGTCGGT GCTGATCGCA CCGCTGCCGT ATCGCGACGC CGACCGCATC
ATCGCGCTGA ATACGCAGTT CACCAACGAA GGCCGCAGCA TCAACCGCGT TACCGGCGCC
GATTTAATGG ACATTGAGGC GCAGTCGAAA TCGTTCGAAC AGGTTGCGTA CTACTTCGGC
GGCGAGATGG GCGTACAGTT GCCCGACCAC GCAGCCTTCA CTGGCGTGCA AGGCGCGACT
GCGAACTTCG CGAACGTCTT CGGTGTAACG CCAGTTGCTG GGAGACTATT CAATGATAGC
GAGGCCACGC ACTCTGCGCT GATCAACGCC AACTTTGCGC GCGACAACTT CGGCAGCGTG
GAAGCCGCCG TCGGCAAGTC GCTCAGCGTC GAAGGCACGA CCTACGACAT CGTCGGCGTG
TTGCCCGGTG AGTTCAGCTT CCCCAAGGGC ACCCAGGTCT GGATGGGCGT ATCGGACACT
CCCGAAGCTG AGTGGTCACA TCGCACTTCT TATAACTTCC GTTCCGTCGC GAAGGTTAAG
GCTGGCGTTT CGATGACGGC CGCGCAGTCG GAACTGAACA CCATTGGCGA TCGCCTCCGC
ATCGCGTATC CGGCTGACAA CAAGAACAAA GCGTTCCTCG CGGTTTCGCT ACAAGAACAG
TTGGTCGGCA AAGTACGCCC CATGTTTCTG CTGCTCGTCG GTGCCGTTGC ATTGATCCTG
CTCATCGCCT GTGTGAACGT CGCGCATTTG CAGTTGGCGC GGGCCACCAC CCGAACCAAA
GAAGTCGCAT TGCGTAGCGC GCTCGGCGCC TCGCGCACGC GGGTGGTGCG CCAAGTGTTT
CTCGAAAGCC TGGTGCTCGC GTTCCTCGGA GCAGGTGTCG GCCTACTGAT TGCCGTTCCG
CTCCTTCGCA GCTTCCTGCG CCTCGCGCCG ACGGACATCC CGCGCCTCAA CGAAGTCCAC
ATCAGCGCGC CGGCAATCGC ATTGATCGCT GTGGTCAGCG TGATTGCGAC GCTGCTCTCC
GGCGTTGCAC CCGCATGGCA GTCGCTGCGG CTGAACGTCA ACGAATCGTT GAAACAGGAC
ACCTCGCGCG GCATGGTAGG CCGCGGCGTC TCGAAGCTTC GTAACGTACT GGTCGTCGCG
GAGATCGCGT TGACCTTCGT TCTTGCCGCT GGCGCAGGCT TGCTGGTGCG CACCATGATC
AAGCTCAACG CGACCGATCC CGGCTATCGC AGCGACCATC TGCTCGTAAT GTATGTGCAC
GCTCCGGCGA AAGGTTTGCT GGAGAATTTG CAGCGCACGC AGCAGATGGA AACGCTCTTC
GATCAGCTGC GCGCCGTTCC CGGCGTAACG GCGGTCGCCG GTGTGATGGG CCTGCCCGCC
GGCCAATACG GTTCCAACGG TGGCTACCAG ATCAGCGGCC AGACGCTGCC TGCCTCACTT
GACGACCTGC CGCAGGCAAA CTGGGCGTTG AGCAGTCCAC AGTATTTCTC GACCATGGGC
ATTCCTTTGC TGCGCGGACG CGACTTCCAG AAGAGTGATA CGCACGATTC GGAACCCGTC
GCGATCATCA GCGATGCGAT GGCGAAACAG AGTTTTGGCA ACAGCGATCC CATCGGCAGG
CAGCTCCGTT GCGGGCTCGA TGAAGAGAGC GGGAAGTGGA TGACCATCGT CGGCGTTGTC
GGCGATGTTC GCCAGGATTC ACCCGCTTCC ACTCCGCGTG CCACCTTATA TCTGCCGCTG
AAGCAGCACC CCTTCCGCGC GAACGAGTTG CAAGTCGTGA TGCACACCGA ACTGCCGCCG
CTCACGCTGA TGGAGACGGC GCGCAAGATG GTGCAGGGCA TGGATCCGCG CATCGCTACG
AAGTTCACCA CCATGGATTC CATGCTGGCA GAATCCACCG CCACGCCGCG CTTCCGTAGC
TGGCTCGTCG GCGGGTTCGC AAGCCTAGGC TTAATTCTGG CGATGCTCGG CATCTACGGC
GTGATGGCGT ATACCGTGGC GCAGCGCACC TTCGAAGTCG GCGTGCGCAT GACTTTCGGC
GCGCAACCCG GCGACATCCT CGGCATGGTG CTCGGCCGTG CGATGCGCCT CACAGTCATT
GGTGTAGTAG TCGGTCTGGT GCTTGCCGCC GCTTCATCGC GGCTCATTGC GAGCATGTTG
TTCGGGGTCC CCGCAGAAGA TCCGGTTTCA TTTGGCGTGG CGTGCGGTTT ATTGGCGCTG
GTGGCGTTGG CCGCGGCGTA CTTCCCAGCG CGCCGGGCAG CATCGGTGAA TCCTCTTACG
GCAATTCGGT ACGAGTGA
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| Protein sequence | MMTGLLQDLR YAWRQLRKSP GFTAVAVLTL ALGIGANAVV LAAVQSVLIA PLPYRDADRI
IALNTQFTNE GRSINRVTGA DLMDIEAQSK SFEQVAYYFG GEMGVQLPDH AAFTGVQGAT
ANFANVFGVT PVAGRLFNDS EATHSALINA NFARDNFGSV EAAVGKSLSV EGTTYDIVGV
LPGEFSFPKG TQVWMGVSDT PEAEWSHRTS YNFRSVAKVK AGVSMTAAQS ELNTIGDRLR
IAYPADNKNK AFLAVSLQEQ LVGKVRPMFL LLVGAVALIL LIACVNVAHL QLARATTRTK
EVALRSALGA SRTRVVRQVF LESLVLAFLG AGVGLLIAVP LLRSFLRLAP TDIPRLNEVH
ISAPAIALIA VVSVIATLLS GVAPAWQSLR LNVNESLKQD TSRGMVGRGV SKLRNVLVVA
EIALTFVLAA GAGLLVRTMI KLNATDPGYR SDHLLVMYVH APAKGLLENL QRTQQMETLF
DQLRAVPGVT AVAGVMGLPA GQYGSNGGYQ ISGQTLPASL DDLPQANWAL SSPQYFSTMG
IPLLRGRDFQ KSDTHDSEPV AIISDAMAKQ SFGNSDPIGR QLRCGLDEES GKWMTIVGVV
GDVRQDSPAS TPRATLYLPL KQHPFRANEL QVVMHTELPP LTLMETARKM VQGMDPRIAT
KFTTMDSMLA ESTATPRFRS WLVGGFASLG LILAMLGIYG VMAYTVAQRT FEVGVRMTFG
AQPGDILGMV LGRAMRLTVI GVVVGLVLAA ASSRLIASML FGVPAEDPVS FGVACGLLAL
VALAAAYFPA RRAASVNPLT AIRYE
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