| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0369 |
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| Symbol | |
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| ID | 4068996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 410924 |
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| End bp | 413491 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637982372 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_589448 |
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| Protein GI | 94967400 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.476838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAGA ACCTTATTCA GGATGTGCGT TACGCGTTCC GCCAGTTGCG GAAGTCGCCC
GGCTTCGCCG CAACCGCGAT CATCACGCTG ACTCTCACCA TCGGCGCCAA TACCGCGATC
TATAGCCTCT TCGACCAGGT CCTGCTGCGC AATCTGCCGG TGAAAGATCC GAAGGGTCTT
GTCGTCTTCG AGTACAAAGG CTCGCACACT GGTTCCACCA ACAATCACGG CGGCCCGTCG
GGCGCTTACT TCTCGTATCC GATGTACAAG GACATTCGCG ATCGCAACAC TGTGTTCGAC
GGCGTGATCG CGTCCGATAT TTCGCAAGTC GGCCTGCAGT GGCACAACCA GCCAGAGCTC
GTGAACGCCG AACTCGTCAG TGGCAACTAC TTCGATGTTC TCGGTGTTCG TCCGGCCGCC
GGCCGCCTGT TTGTGCAGGC CGACGACGTG GTGCCGAATG GAAATCCGCT CGTTGTCCTC
AGCTACTCGT ATTGGCAGCG GCGCTTCGGG CTCGATCCCA AAGTAGTCGG CGATAACGTC
CTCATCAACG GCCACCCATT CACCGTGATC GGCGTTTCAG CGCCGGGTTT CCAGAGCATG
CAGACCGGCT ACCTTCCAGC GATCTATACG CCGATGATGA TGAAGGAACA GGTGACGCCC
GGGTGGAACG ACCTCGACAA TCGGCGCTCC ATTTGGCTCA ATATAATTGG CCGTCTGAAG
CCCGGGATGA CCATGGCGCA GGCAGAGGCA GGCCTGGATT CGCTCTGGCA TTCGGCGCGC
GAAGAAGAAC TGAAAGAGGT TCGCAACAAG AGCGACAAGT TCCGCGAAAA TTTTGGGCCG
AAGAGCCACC TCTATCTTCA CAACGGAGCG CGCGGCTTCT CGCTCCTCGA CCAATATCGC
ATGCCGATGC TGATTGTGAT GGGCATGGTG TTGCTCGTCG CAGTGATGGC GGCCGTGAAC
GTTGCGACGC TGTTGTTGGT TCGCGCGGCG ACTCGCGTGA AAGAGATGTC GGTGCGCTAC
GCAATGGGCG CGCGCCGTAC TCGCGTGATT CAACAGCTGC TGAGTGAAGG TTTGATCCTT
GGACTCATCG GCGGTGCGCT CGGCATCGTC CTTGCTCCAC AGGCCTCAGC GCTGCTTATT
CGCAAAGCCT TTGCAGATTC CAACGGCAAC GTGCCGTTCT CGTCCTCACC CGATATGCGT
GTGCTGGCCT TCAATTTTGG GCTGGCGCTA CTGGTGAGCC TGGTATTCAG CATTGCTCCG
GCGGTCCAGT TCTGGCGGCC GAACCTCATA CCCGCTCTTA AACAGCAAAC CGTCACCACC
GCGGGTGGCG CGTTGCGCTT CCGCAGACTG TCGGTCGCAG TGCAGGTCGG CGTGAGTCTA
GTTCTTCTCG TGGGCGCCGG ATTATTCGTA CGCACCTTGG GCAATCTGAA GTCGGCGGAT
GTTGGCTTCG TCACCCAACA CTTGATCACG TTCCAGATCG ATCCCCAGCT CGCCGGTTAT
GAAGACAATC AAACGGCCGT TCTTCACAAG CGCATCACCG ACTCCCTGAA AGCCCTGCCC
GGCGTACAGG CTGTGGCTTC CACCGCGGAC CCGGAACTGG CGAACACGAA TAGCTCGAGC
AATTTCAGCA TCGCCGGCAT AACTGAGAAG GAAGGCGATG ACATGAACGC CGAGTGGCCG
AATGTCAGCG CCGGGTATTT CTCGGCGATG CAGATTCCGC TGATCACGGG CCGTGACTTT
ACCGAATCCG ACGCCGCCGG TTCAGGCAAT GTCGCTGTTA TTAACGAAAC GTTGGCAAAG
AAGCATTTCG GATCGCCGGA CAAGGCCATT GGCAAAGTGT TGGCCCGCGG CTCGGGAGAC
GACGCCAAGT ACGACATCCA GATCGTCGGC GTAGTGCGCG ATTCGAAGCA CACCAACGTT
CGCGACGAAG TGAAACAAGC TCTCTTCACA CCGTTATCGC AGATGCAGCA CTGGGTGCGC
GATCCGAAGA AGCCGGGCGC AAAGGAAGTG CTTGTGCCCG ATCAGCCGGG GTTCCTCGCT
TACTACGTGC GCACCTGGCA GCCGACCGCA TCGGCGATGA GCCAGATCCG CGGCGCAGTG
CAGGGCGTGG ATTCGAAGCT GGTGCTCGAC ACCTTCCGCA CCATGGATGC ACAGATTGAC
GACGACGTGA ATACCGAGCG CATCATCGCC CTGCTCGCTT CGGGTTTCGG CATCCTCGCA
GCGATCCTTG CGGCGGTCGG ATTGTACGGC GTCCTCGCTT ATTCCACGGC GCAGCGCACC
CGCGAGATCG GGGTACGCAT GGCGCTTGGC GCCACCCGCA TGTCCGTGGT CCGCATGGTG
CTCACGGAAG TGCTCTGGCT CGCCGGCGCT GGAATTATCG TGGCGCTGCC GGTATCCATC
GTGCTCAGTC GGTTCATGCG GGCGCAGTTA TACGGAGTGT CCCATTACGA CCCGCTGACG
GTTTTTGCGG TAGTGCTACT GGTGACGCTG GTGGCGGTGG CAGCGGCGAC GTTGCCGGCA
CGGCGTGCCG CTGGCATCGA CCCGATGAAG GCATTGCGCT ACGAGTAG
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| Protein sequence | MFENLIQDVR YAFRQLRKSP GFAATAIITL TLTIGANTAI YSLFDQVLLR NLPVKDPKGL
VVFEYKGSHT GSTNNHGGPS GAYFSYPMYK DIRDRNTVFD GVIASDISQV GLQWHNQPEL
VNAELVSGNY FDVLGVRPAA GRLFVQADDV VPNGNPLVVL SYSYWQRRFG LDPKVVGDNV
LINGHPFTVI GVSAPGFQSM QTGYLPAIYT PMMMKEQVTP GWNDLDNRRS IWLNIIGRLK
PGMTMAQAEA GLDSLWHSAR EEELKEVRNK SDKFRENFGP KSHLYLHNGA RGFSLLDQYR
MPMLIVMGMV LLVAVMAAVN VATLLLVRAA TRVKEMSVRY AMGARRTRVI QQLLSEGLIL
GLIGGALGIV LAPQASALLI RKAFADSNGN VPFSSSPDMR VLAFNFGLAL LVSLVFSIAP
AVQFWRPNLI PALKQQTVTT AGGALRFRRL SVAVQVGVSL VLLVGAGLFV RTLGNLKSAD
VGFVTQHLIT FQIDPQLAGY EDNQTAVLHK RITDSLKALP GVQAVASTAD PELANTNSSS
NFSIAGITEK EGDDMNAEWP NVSAGYFSAM QIPLITGRDF TESDAAGSGN VAVINETLAK
KHFGSPDKAI GKVLARGSGD DAKYDIQIVG VVRDSKHTNV RDEVKQALFT PLSQMQHWVR
DPKKPGAKEV LVPDQPGFLA YYVRTWQPTA SAMSQIRGAV QGVDSKLVLD TFRTMDAQID
DDVNTERIIA LLASGFGILA AILAAVGLYG VLAYSTAQRT REIGVRMALG ATRMSVVRMV
LTEVLWLAGA GIIVALPVSI VLSRFMRAQL YGVSHYDPLT VFAVVLLVTL VAVAAATLPA
RRAAGIDPMK ALRYE
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