| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0368 |
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| Symbol | |
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| ID | 4068995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 408463 |
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| End bp | 410913 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637982371 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_589447 |
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| Protein GI | 94967399 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGGAT TCGCACAGGA CCTGAGGTAT TCGTTTCGCC AATTGAAGAA AAGTCCGGTG
TTCGCGATCA CCGCAGTGCT CACACTGGCG CTCGGAATCG GAGCCAACGT CGCCGTATTC
TCGGTGATGA ATGCGACCCT CTTGAATCCC AGCGGCGTGC CACACGCTGA CGGCGTGGTC
GCACTGCGCG CGGGCTATAA CCAGGGCGAC CTCGGCAACA TTAATCTCTC GCCGCCGGAC
TTCGAAGACG CTTCCGAAGG TAAGGAAGTC TTTACCTCCG CGGCCGTGAT GAACGGCATG
GACTACAACT ACAGTCCGGA TGGCGGCGGC ACGCCCGAAC TGTTGCGTGG CGCGAAGGTC
ACCTGGCAGT GGTTCGACGT CTTCTGGGCG CAGCCGATGA TGGGACGTGT CTTCCGTCCG
GAAGAAGACC AGCCCGGTGC GGAACACGAG GTTGTCCTCG CTTACAGCGC GTGGCAAAAG
CGTTTTGGTG GTGACCCGCA CATTCTTGGC CGAAAGCTCC AGCTCAACCA GGAATCGTAT
GAAGTTGTCG GCGTGATGGG CCCGGAATTC GCGTGGCCGA ACCGCGCCGA AATGTGGACA
CCGCTGGCGC TCACTCCGAG CCGCTATACC GATCCCAACT ACCGCTTCAA CGAATATCTG
TTTGGCGTGG CGCGCTTACG GCAGGGCAAA ACTCTCGCTG ATGCCAACAC GTACCTCACG
CATCGCACGC AGCAGGTTTA CCAAACCGGC GGTCGTCTTT CTGACTATGC GAAGTCTGCG
CAGTGGCACC AGTTCGCAAT GCCGCTGATC GAATTCGTAT CCGGCAAAAT GCAGAAGCCC
CTGGCGTTCC TGCTCGGCGC CGTCGCGCTG GTGCTTTTGA TTGCCTGCGC CAACATCGCT
GGTCTGCAGT TGGCCCGCGC TTCGGGACGT CAACGTGAAG TCTCGATCCA GATCGCACTC
GGCGGCTCAC GCGGACGACT GATCCGCCAA GCCTTATCGG AGAGCGTGCT GCTGGCATTG
TCAGGCGCGC TTCTCGGCGT GGTCGTCGCG AAGCTTTCGA TCCCCTTGTT GCTCGCGCTT
GCGCCGCCCA GCATTGGTCG CACTGTCAGC GCTCCCATGG ACGCCCGCAT GCTCCTCTTC
GTTGCCGGCA TCGGCGTGCT CTGCGCACTG CTTTGCGGAA CTGCGCCCTC GTGGCACATG
ACGCACATTC GCTGGTTCCA GGCATTGCAG GAAGGTGGCC GCTCTGATTC CGCCAGCCCC
GCGCGCCAGC GCACACGCTC TGCACTGGTC GTTGTCGAAA TCGCCATCGC GATGTTGCTT
TTGTTCGGCG CGGGATTGTT GGTACGCAGC ATGAACACGA TCCAGCAAGT TGAGACCGGC
ATGCAGCCAC ACGGTGTAAT GACCGCTGCT TTGACGTTGC CCAAAGCCAC GTACAAGACC
GACGAACAGC AGGCCAACTT CTACAACTCG CTTGAAGAGC AGTTGAAGCA GATCCCCGGC
GTGCAGCACG CCGCGATTGT GGACTCGATC CCGTTCAGCA ACGGGGGTGG TTCCGCTTCG
TTCTTCATCG AAGGCAAGCC GGTAGCGAAC GGCGCGCTCG GGCCACACGC AAACATTCGT
TCGGTATCGC CCGAATATTT CGAGACTCTC GGTATTCCGC TAATGCGTGG CCGCTTCTTC
ACTTCCGCCG ATCGCGCGAA AACACAGCTT GTCGTGATCA TTGATGACGT TCTCGCGCGC
CAGTACTTCG GCGATAGCGA CCCGATCGGT CAGCACATCA ACTTCGGCGA TCCGCCGGAC
AAAGATCCCT GGCGCGAGAT CGTGGGCATC GTGCATCACG CACGCGCCAC GTCGCTGGAG
AACGACACCA ACGAAGGCTT CTACTACTTC CCAATGGCGC AAGCGCCGAA CGACTCAAGC
TTTATCGCCG TGAAAACGAA CGGCGCGGCC GCGGGTCTCG TTGGGCCGAT TCGCAATGCT
GTGCGCAACG TCGATCCGAG CCAAGCCCTA TATGACGTGA AGGCGATGGA CGAGCGCGTC
GATGACTCAC TCATTGGCCG CCGTTTCCTC GTTGTCCTGC TCTCGGTATT CGCGGGCCTC
GCGCTGCTAC TCTCCGCCGT CGGATTGTAT GGCGTAATTG CATACTCCGT CCGTCTGCGT
ACCCGCGAAC TCGGTGTGCG CATGGCCCTC GGCGCGCAAC GCAGCGATGT CCTGAAACTC
GTGCTCGGTC ACGGCATGCA GCTGGCAGTC GCCGGCCTCG TCATCGGGTT AGGGACGGGA
CTTGCGCTCA GCAAAGTGTT CGAGAGTCTC TTATTCAAAG TTTCCGTCTT CAACCCCGTG
GCGCTGCTTT CCACCTGCGC CCTGCTGATG GGAACCGTGT TGTTTGCAAG CTATCTACCG
GCGCGCCGCG CGGCCAAGCT TGATCCCATC CGTACGTTGC GCGACGAGTA G
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| Protein sequence | MRGFAQDLRY SFRQLKKSPV FAITAVLTLA LGIGANVAVF SVMNATLLNP SGVPHADGVV
ALRAGYNQGD LGNINLSPPD FEDASEGKEV FTSAAVMNGM DYNYSPDGGG TPELLRGAKV
TWQWFDVFWA QPMMGRVFRP EEDQPGAEHE VVLAYSAWQK RFGGDPHILG RKLQLNQESY
EVVGVMGPEF AWPNRAEMWT PLALTPSRYT DPNYRFNEYL FGVARLRQGK TLADANTYLT
HRTQQVYQTG GRLSDYAKSA QWHQFAMPLI EFVSGKMQKP LAFLLGAVAL VLLIACANIA
GLQLARASGR QREVSIQIAL GGSRGRLIRQ ALSESVLLAL SGALLGVVVA KLSIPLLLAL
APPSIGRTVS APMDARMLLF VAGIGVLCAL LCGTAPSWHM THIRWFQALQ EGGRSDSASP
ARQRTRSALV VVEIAIAMLL LFGAGLLVRS MNTIQQVETG MQPHGVMTAA LTLPKATYKT
DEQQANFYNS LEEQLKQIPG VQHAAIVDSI PFSNGGGSAS FFIEGKPVAN GALGPHANIR
SVSPEYFETL GIPLMRGRFF TSADRAKTQL VVIIDDVLAR QYFGDSDPIG QHINFGDPPD
KDPWREIVGI VHHARATSLE NDTNEGFYYF PMAQAPNDSS FIAVKTNGAA AGLVGPIRNA
VRNVDPSQAL YDVKAMDERV DDSLIGRRFL VVLLSVFAGL ALLLSAVGLY GVIAYSVRLR
TRELGVRMAL GAQRSDVLKL VLGHGMQLAV AGLVIGLGTG LALSKVFESL LFKVSVFNPV
ALLSTCALLM GTVLFASYLP ARRAAKLDPI RTLRDE
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