| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0341 |
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| Symbol | |
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| ID | 4070103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 371186 |
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| End bp | 373810 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637982344 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_589420 |
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| Protein GI | 94967372 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.474901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGGA TTCTTCAGGA CTTGCGTTAC GGGTTGCGAA TGCTCGGCAA GCGGCCGGCA
TTCACGCTGC TGATTGTGCT GTCGCTTGCG CTGGGGATTG GCGCAAATAC CGCGATCTTC
AGCGCTGTGA ATGCGGTGAT GTTGAAGACA TTGCCTGTCT ACAATCCGGC GCAGCTCAAG
CTCATGCAGT GGACGGTGCC GACCTCCGAC TTCCCGGATG CTTACCTCGA AGATCTGGAA
GGCAGCTTTA CGCGCGTGGC AGGTGGGCGC TTCGGCAGCT ATTCGTTTTC GTATCCGGCG
TACGAGGACT TTGCGGCCAA GAACCATTCC TTCGATACGA CGTTTGCTTT TGCCGCCAAC
GAAGAGAACG TGAACGTGGG ATTGAACGGC CATGCCAGCA ATGCGACGCT GGTTGGCATC
TCGGGAAATT TCTTCAGCGG CATGGGGCTG TCGCCCGTCG CCGGACGTGG CCTGCAGCCG
AGTGATGATG CGACTGGTGC GCAGCCGGTG GTGGTGATCT CGCACAAGTT CTGGCAGAAG
CAGTTCGGCG GCCAGGCGAG CGCAATCGGC GGCACGATCG ACGTGAATGG GAGCCCGATG
ACTGTGGTCG GCGTGGCGCC GCCGGAGTTT TTCGGCGTGG ACCCGAGCAT TGAGCCGGAT
GTCTACGTGG CGATGCATTG GTATGCCGAG CAACTCGACA AGCTCAACAA CCCTCTGCTT
TCGATGGCTG ACAAGCAGGC GGAACCGAAT AGCTATCTTC GCAGTCGGCG CGCGTGGTGG
GTTGGCGTCA TCGGACGCAT TAAGCCTGGG GTTTCGGACG CAACCGCCAA TGCCGAGTTG
AGTGTTCTGT TCTCGCAAGC GCTCGACACG AAGAAGCAGT CGGAAGGCGG CACCGAGGGA
CTGTTTGGGG GCGACGGCGG CGCGCCGGAA GAACATGCGC AGGCTGCGAA GAAGGCTCCA
CCGCAAATTG GAACGGTTCC GCTTGCTCGT GGTCTCGATA GCCTTCGCCG GAATTTCTCC
ACGTCCCTTT GGCTGCTAAT GGGGATGGTG GGGCTAGTGT TGCTGATTAC GTGCAGCAAC
GTGGCCGCGC TGCTGCTTAC CCGCGCGACC TCGCGGCAGA AAGAAGTCGC AGTAAGGGTC
AGTCTCGGCG CGCCGAAGTC GCGCATTATC CGCCAGGTGT TTACCGAGAG CCTGTTGCTC
GGCATTCTCG GCGGCATCGG CGGATTGGTC GTAGCGCGAT GGGCGACGGC CCTGCTGGTG
CAACTGATGT CGAGCGGACG CTCGGCCGTG CACGTGGAGC TTGCGCCGGA CGCGACCGTG
CTCGCATTCG CATTCGGAAT TACGTTTCTC AGCGCGCTGG TGTTTGGAGT GGCGCCCGCT
TGGCATGCAG CCAAGGTGCA GCCGCTCACG ACGCTGAAGC AAACCGCGGG GAGCGTTACG
AATAGAAACT TTTTCTCGGG CAAAGTGCTG GTCGCCGTGC AGATCGCGTT GTCGTTTGTG
CTGCTGGTTG CGTGCGGATT GTTCCTTCGT ACGCTGGGTC GACTGCAGAA CGTAGACCTC
GGGTATCAGC GTGCCAACAT GACGCGTTTT ACCGTTAGCC CTGGGCTGAA TGGCTACACC
AACGATCAGC TCATTGCGTA CTACCACAAC ATGCAGTCGC AATTGGGCGC GGCACCAGGG
GTTCAGGCCG TCACTTTTTC GCTGCACGGA CCGATCGGCT CCGGATCGTC GGTGACCACC
GGACGCATCC AGGGCTACAC GCCTGAGGGC AAAGATGTGG ACATTTACCG CCACGATGTC
GGTCCAGCAT ACTTCGAGAC ACTGCAGATT CCGATTCTGC TCGGACGCGG TATTGGAGAG
GTGGATGGCC CCACCGCGCC GCAAGTCGCC GTGATCAACG AAGCGCTCGC GAAGAAATAC
TTCCGTGGCG ACAACCCGAT CGGACACCAG ATCAATCTTG GTTCGGTGAA GAAGCCGCGG
CCATACCAGA TCGTCGGAGT TGCGCGCGAC GTGAAGTATG CGCAGATCCG CGAAGAGGTG
CCTCCGACCG CGTATTTCTC CTATATCCAG CGCAAAGAAG TACCGCAGTT CATGACCTTT
GAAGTGCGCA GCACCCTGCC GCAGGGAACG CTCGTCGCCC TGATCGAGAA AACGGCGATG
CAACTCGACA AGACCGTTCC CGTCGAAAAA ATCCACACCG AGGAAGAGGT GGTAGGCCAA
GTGCTCTTCC TCGAACGCAC GTTTGCGATG CTGAGCAGCG GGTTTGGAGT GTTGGCGCTG
TTGCTCGCCG CGATCGGGCT CTATGGCACC ATCGCCTACA CCGTCGCGCA ACGGACAAAC
GAGATCGGCA TCCGCATGGC GCTTGGCGCG GACCGCACCC GGATTGTGCG CATGGTATTG
CGCGAAATCG GCATTGTTGT TGTCGCGGGC CTGGCCGTCG GGCTGCCGGT AGCGTGGTTC
GCGAGCAAGA CGCTGCAAAG CCAACTATTC GGGCTGTCGC CGCATGATGC ACTCTCGCTC
GGGCTCGCAC TGCTGACGAT CTTCCTAGTA GCGGTGCTCG CCGGCTCGAT TCCTGCGCGA
CGGGCCTCGC GCGTGGAACC GATGGAAGCG CTGCGTTACG AATAA
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| Protein sequence | MGRILQDLRY GLRMLGKRPA FTLLIVLSLA LGIGANTAIF SAVNAVMLKT LPVYNPAQLK
LMQWTVPTSD FPDAYLEDLE GSFTRVAGGR FGSYSFSYPA YEDFAAKNHS FDTTFAFAAN
EENVNVGLNG HASNATLVGI SGNFFSGMGL SPVAGRGLQP SDDATGAQPV VVISHKFWQK
QFGGQASAIG GTIDVNGSPM TVVGVAPPEF FGVDPSIEPD VYVAMHWYAE QLDKLNNPLL
SMADKQAEPN SYLRSRRAWW VGVIGRIKPG VSDATANAEL SVLFSQALDT KKQSEGGTEG
LFGGDGGAPE EHAQAAKKAP PQIGTVPLAR GLDSLRRNFS TSLWLLMGMV GLVLLITCSN
VAALLLTRAT SRQKEVAVRV SLGAPKSRII RQVFTESLLL GILGGIGGLV VARWATALLV
QLMSSGRSAV HVELAPDATV LAFAFGITFL SALVFGVAPA WHAAKVQPLT TLKQTAGSVT
NRNFFSGKVL VAVQIALSFV LLVACGLFLR TLGRLQNVDL GYQRANMTRF TVSPGLNGYT
NDQLIAYYHN MQSQLGAAPG VQAVTFSLHG PIGSGSSVTT GRIQGYTPEG KDVDIYRHDV
GPAYFETLQI PILLGRGIGE VDGPTAPQVA VINEALAKKY FRGDNPIGHQ INLGSVKKPR
PYQIVGVARD VKYAQIREEV PPTAYFSYIQ RKEVPQFMTF EVRSTLPQGT LVALIEKTAM
QLDKTVPVEK IHTEEEVVGQ VLFLERTFAM LSSGFGVLAL LLAAIGLYGT IAYTVAQRTN
EIGIRMALGA DRTRIVRMVL REIGIVVVAG LAVGLPVAWF ASKTLQSQLF GLSPHDALSL
GLALLTIFLV AVLAGSIPAR RASRVEPMEA LRYE
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