Gene Acid345_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0338 
Symbol 
ID4070100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp368665 
End bp369318 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content58% 
IMG OID637982341 
Producthypothetical protein 
Protein accessionYP_589417 
Protein GI94967369 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.845056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTTGCA GCCTCGTAAT GCCTAAACTC ACGTCAGAAA TGAAACAACT CATTCCCTGG 
TCCATGACGC TCGGTCGCGT GCTCTTTGCG CCGATTGTCA TCTGGCTTGC GCTTACCGGC
CGCAGTGGCT GGTGGATTTC CGCCTGCATC GTCGCTGAAG TCGTGCTCGA TATTTTCGAC
GGAATCGTGG CGCGACGGCT GGGAGTGGCC ACGCCGCTGC TCCGCCGCAT GGATAGCGTG
ATGGACACCA TCTTCTATCT TGCGATTCTC TACATCGGAT GGAAGGTGCA CTATGACGTG
CTCTGGGAGC GTCGCTGGCT GCTGGCTGGA CTGATCGCGA TGGAACTGTT GCGCTACTCG
TTCGACTACC TGAAATTCCG ACGGGAAGCC GCGTATCACA TGTATAGCTC GAAGGCGTGG
GGACTGCTCC TCGGAGCGGC GGTGATCGCG CTGCTCGGAT TTAACATCTC GGGCTGGTTA
CTTTCCGCAG CGCTGGTCGT CGGAATCTTG TGCGATGTCG AGGGCCTGGT GATCTCCTGG
CTGCTCTACG AGAGCGTGGA GGACGTGCCG CACATCGCGA GGGCCCTGCA ATTGCGTCGT
GAGCAACGGC AGCGACGCAG GAGTACTAAC ACTTTCGCTG CAACCGCAAA GTAA
 
Protein sequence
MFCSLVMPKL TSEMKQLIPW SMTLGRVLFA PIVIWLALTG RSGWWISACI VAEVVLDIFD 
GIVARRLGVA TPLLRRMDSV MDTIFYLAIL YIGWKVHYDV LWERRWLLAG LIAMELLRYS
FDYLKFRREA AYHMYSSKAW GLLLGAAVIA LLGFNISGWL LSAALVVGIL CDVEGLVISW
LLYESVEDVP HIARALQLRR EQRQRRRSTN TFAATAK