| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0334 |
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| Symbol | |
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| ID | 4070096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 364377 |
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| End bp | 365234 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637982337 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_589413 |
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| Protein GI | 94967365 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.841681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.545556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCGA AAGACTTGCT TCAGGGAAAA CGCGCACTCA TCACGGGCGG CGGCACGGGC
CTCGGCAAAG CGATGGCACG GCGGTTTCTC GAACTCGGCG CGACGGTGTA CATCTGCGGG
CGTCGCGAAG AAGTGCTGCG CGGAACCTGC GAAGAGCTGA CGTCAGCGAC TGGGGGCGAG
ATTCACGGCA TTCCCTGCGA TGTACGAGAT CTCGCGGCGG TAGACACAAT GATCACGCAG
ATCTGGAACG ATGGCCCGCT CGATATTCTT GTGAACAACG CCGCCGGGAA TTTTCTGGCG
AAAACCGAGG AACTCTCTCC GCGCGCGTGG GAGGCCGTGA TTGGAATCGT GCTCAACGGA
ACGATCAATC TGACGATGGC ATGCGGACGT CGCTGGCTGG CGGAGAAGAA ACCCGCGAAC
GTGCTGAGCA TCGTCGCCAC CTATGCTTCT ACCGGCTCAG GCTCGGGCTA TGTGGTTCCG
TCGGCGGTCG CGAAAGCCGG AGTGTTGGCG CTTATGCGCA GCCTCGCTGT CGAGTGGGGA
CCTCGGGGTA TTCGTCTCAA CGCGATCGCG CCGGGGCCGG TGCCGACGGA AGGCGCCTTC
TCGCGATTGA TTCCAAGCGA TCAACTAGAA GAAATCGCAA AGCAACGCGT GCCAATGCGG
CGCTTCGGAC GACCGGAAGA GATTGCAGAT CTCGCAGCGT TTCTCGTGAG CGACGGTGCC
GGCTACATCA ACGGCGAGGT TGTCACCATC GACGGTGGCG AGTGGCTGCA AGGCGCGGGC
GAGTTCAACT ACGTCGGACA GATGATGACC GACGAAATGT GGGCGATGTT TAAGCCCGGC
AAAAAGCGCC GCGAATAA
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| Protein sequence | MFAKDLLQGK RALITGGGTG LGKAMARRFL ELGATVYICG RREEVLRGTC EELTSATGGE
IHGIPCDVRD LAAVDTMITQ IWNDGPLDIL VNNAAGNFLA KTEELSPRAW EAVIGIVLNG
TINLTMACGR RWLAEKKPAN VLSIVATYAS TGSGSGYVVP SAVAKAGVLA LMRSLAVEWG
PRGIRLNAIA PGPVPTEGAF SRLIPSDQLE EIAKQRVPMR RFGRPEEIAD LAAFLVSDGA
GYINGEVVTI DGGEWLQGAG EFNYVGQMMT DEMWAMFKPG KKRRE
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