| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0328 |
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| Symbol | |
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| ID | 4070090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 355532 |
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| End bp | 357187 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637982331 |
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| Product | Alpha-L-arabinofuranosidase |
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| Protein accession | YP_589407 |
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| Protein GI | 94967359 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.48322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.88573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTC GCCGTGATTT CCTTCGTTCC ACTGCCATTG GCGCTGCTGG ATTGGCGCTG
ACCCGTTTCT CGCTGCCGTC GCTCGCGCAA AGCCGCAGCG TCGATTCCCG GATCGAGGTG
CTGCTCGACG AACCGCTCGG GACCATCTCG CCGAACATTT ACGGTCACTT CACCGAGAAC
CTGGCCGGGG TGTTTTACGA CGGAATCTGG GTTGGCGAGA ATTCGAAGGT CCCGAACGTC
GGCGGGCTGC GTAAGGCCGT GATCGACCAC ATGCGCAAGA TCAAGGCCCC CGTGATTAGA
TTCCCAGGCG GATGCTTTGC CGACACCTAC GACTGGCGCG ACGGCATCGG CCCACGCGAA
AAGCGGCCGC GGCGCCCGAA CTTCTGGGGC AATGGCGACC CGAAGCAAAA CGTAAAGCAC
AAGTACGACC CCAATGAGGT TGGTACCGAC GAGTTCATGC ATTTCTGCCG CGAGATTGGC
GCACAGGGAT ATCTTGCAGC CAACGTGCGC AGCCTTCCCG CGGAGCAATT CCAGCAGTGG
GTGGATTATT GCAATTCGCC TGCGGGGAGC ACGACGCTGG CGGAAACGCG CGCGACGAAC
GGCTCGCGTG AGCCTTACAA GGTGGAGTTC TGGGGCGTGG GGAACGAGTC TTGGGGATGC
GGCGGCGACT TCGAGCCCGG CCAATATGCG ATGGAATTTC GCCGCTACGC CACGTGGGTG
CCAGGCTTCG GAATGAACTT GAAATTCATT GCCTCCGGGC CAAACGTGGA GGACTACCAC
TGGACCAGCG GCTTCTTCGA GGCGATGCAG AAGCGGATGG GCTCCCTGCA CATGGTCTAT
GGCTGGGCGC TCCACCATTA CGCCTGGAAC CTGAGCCGCG GCAAAACCAA CGACTGGGAC
AAGGGCAAAG GCGAAGCTGT GAACTTCGAC GCCACCGATT GGTACGAGCT GATGAAGGAA
GGTCAGCGCA TGGAAGGTCT GATCGAGGGA CACTGGCAGG TGATGGGTGA AACCGATCAC
GAGCATCGCG TAAAGCTAGT AGTGGACGAG TGGGGCCCCT GGTACCGCCC GGGCAGCGAA
GCAACTCCCG GGGATGCGCT GGAGCAGATG CCAACCCTCC GCGACGCGGT GTTCAGTGGC
ATGACCCTCG ATATCTTCAA CCGCCATCCT GAAAAAGTGG CGATGGCGAA CTGCGCGCAG
CTCATCAACT GTCTGAACAG TTTGTACCTG GCGCATGAAG ACAATTTCAC GGTGACTCCA
GTTGGGCACG TGTTCGATAT GTATGCGCCT CACCAGGGCG GACAGTCGCT GCGCACGATC
TTCTCTTCAC CGCAGGTGAA GTACGAGCGC GACGGCACAC CGGCGACCTT CTGGGGGCTG
CGCGGTGCCG CGTCTTTAAC CGGGAAAAAA CTCTTCGTCA CGGCGGTCAA TCCGGATACC
AGCTCACCAC GAGAAAGCGA GATTGCGATC CGCGGGGCGA GCGCGGCTTC TGGCACGCTG
ACCGTGCTCT CGGCGCCCGA CATCCACGCG CACAACACCT TTGAACATCC GGATGCGGTA
GTACCCCGTC GGAATGAATT GAAGGTGAAT GGCGCGACGG TGTCGCTCGT GATTCCGCCA
GCCTCCGTGG TCGCAATCGA ATTGGAACTG AGTTGA
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| Protein sequence | MSTRRDFLRS TAIGAAGLAL TRFSLPSLAQ SRSVDSRIEV LLDEPLGTIS PNIYGHFTEN
LAGVFYDGIW VGENSKVPNV GGLRKAVIDH MRKIKAPVIR FPGGCFADTY DWRDGIGPRE
KRPRRPNFWG NGDPKQNVKH KYDPNEVGTD EFMHFCREIG AQGYLAANVR SLPAEQFQQW
VDYCNSPAGS TTLAETRATN GSREPYKVEF WGVGNESWGC GGDFEPGQYA MEFRRYATWV
PGFGMNLKFI ASGPNVEDYH WTSGFFEAMQ KRMGSLHMVY GWALHHYAWN LSRGKTNDWD
KGKGEAVNFD ATDWYELMKE GQRMEGLIEG HWQVMGETDH EHRVKLVVDE WGPWYRPGSE
ATPGDALEQM PTLRDAVFSG MTLDIFNRHP EKVAMANCAQ LINCLNSLYL AHEDNFTVTP
VGHVFDMYAP HQGGQSLRTI FSSPQVKYER DGTPATFWGL RGAASLTGKK LFVTAVNPDT
SSPRESEIAI RGASAASGTL TVLSAPDIHA HNTFEHPDAV VPRRNELKVN GATVSLVIPP
ASVVAIELEL S
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