Gene Acid345_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0258 
Symbol 
ID4070055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp269449 
End bp270534 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content63% 
IMG OID637982259 
ProductrecA protein 
Protein accessionYP_589337 
Protein GI94967289 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATG AACGTACCGA ACGAGGCCGG TCACTGGAAC TGGCGCTGTC GCAAATAGAA 
AAGCAATTTG GCAAGGGCTC GATCATGAAG CTCGGCGCGA AGGGCGCGAT CGTCCCCATC
TCGGTGATCT CGACCGGCGC GATCTCGTTC GATGCGGCCC TCGGTACCGG AGGCTTCCCC
CGCGGCCGTG TAGTGGAGAT CTTCGGGCCG GAATCGTCCG GTAAGACGAC GATTGCGCTG
CAGGTGATTG CCGAGGCCCA GAAGGCCGGC GGCATGGCCG CCTTCGTGGA CGCCGAACAC
GCGCTCGACC CCACCTACGC CCGCAAACTT GGCGTGGACG TTGAGAACCT CCTCGTCTCG
CAGCCGGACT ATGGCGAGCA GGCACTGGAG ATCACCGAAG CGCTGGTCAG TTCGAAGGCC
ATCGACATCC TCGTGGTGGA CTCCGTCGCG GCCCTCGTTC CCAAGGCCGA ACTCGACGGC
GAAATGGGCG ACAGCCACAT GGGCCTGCAA GCCCGCCTGA TGTCGCAAGC GCTGCGTAAG
CTCACCGGCA CCGTCAGCAA GTCCGGCACC TGCCTCATCT TCATCAACCA GATCCGCGAG
AAGATCGGCG TCATGTTCGG CAATCCCGAA ACCACCACCG GTGGTCGCGC GCTGAAGTTC
TACTCGTCGG TCCGCGTGGA CATCCGCCGC ATCGCCGCGA TCAAGGACGG TGACACCGTC
ATCGGTTCGC GCACCAAGGT GAAGGTCGTA AAGAACAAGA CCGCCGCTCC CTTCCGTGAA
GCCGAGTTCG ACATCGTCTA CGGCGAAGGC ATCTCCAAGG AAGGCGACAT GCTCGACCTG
GCCGTCGAAG CCAACATCGT GGAGAAGTCG GGTTCGTGGT TCAGCTACAA GACCGAGCGC
ATCGGCCAGG GCCGCGAGAA CGCCAAGCAG TTCCTCAAGG ACAACAAGGA CATTGCCGCC
CGTGTCGAGG CCGAAGTGCG CAAACACGTC GGGCTGGTGA AGGAGCCGGC AGCCCCGGCA
CCTAACGCCG CCCCGCCTGT CCCGCCGAAC GGCCATGCGG AGAAAGCTGC GGTCGCGCGA
AAGTAG
 
Protein sequence
MSDERTERGR SLELALSQIE KQFGKGSIMK LGAKGAIVPI SVISTGAISF DAALGTGGFP 
RGRVVEIFGP ESSGKTTIAL QVIAEAQKAG GMAAFVDAEH ALDPTYARKL GVDVENLLVS
QPDYGEQALE ITEALVSSKA IDILVVDSVA ALVPKAELDG EMGDSHMGLQ ARLMSQALRK
LTGTVSKSGT CLIFINQIRE KIGVMFGNPE TTTGGRALKF YSSVRVDIRR IAAIKDGDTV
IGSRTKVKVV KNKTAAPFRE AEFDIVYGEG ISKEGDMLDL AVEANIVEKS GSWFSYKTER
IGQGRENAKQ FLKDNKDIAA RVEAEVRKHV GLVKEPAAPA PNAAPPVPPN GHAEKAAVAR
K