Gene Acid345_0251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0251 
Symbol 
ID4070048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp265215 
End bp265538 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content60% 
IMG OID637982252 
ProductRNA-binding protein, RNP-1 
Protein accessionYP_589330 
Protein GI94967282 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.425967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TTTTTGTTGG TAATTTCGCG TTCACCGCCA CTGAAGACGA TATTCGCCAA 
CTGTTTACAC CCTACGGCAA AGTGGATAGC GTTTCCCTCG TCACCGACCG CGACACCGGG
CGCGCCCGTG GTTTCGGCTT CGTCGAGATG CCGAACGACA CGGAAGCAGC TGCAGCCATC
GAAGGCTTGA ACGGCCGCGA TTCCGGCGGA CGCGCGCTCA ACGTCAACGA AGCACGCCCG
AAAACCGAGC GCGGAAACTC GGGTGGCGGC GGTGGTCGCG GTAATTTCCG CGACAAAGGC
CGGAAGCGTG AGCCGCGGTG GTAG
 
Protein sequence
MKKIFVGNFA FTATEDDIRQ LFTPYGKVDS VSLVTDRDTG RARGFGFVEM PNDTEAAAAI 
EGLNGRDSGG RALNVNEARP KTERGNSGGG GGRGNFRDKG RKREPRW