Gene Acid345_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0216 
Symbol 
ID4071669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp229556 
End bp230107 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content62% 
IMG OID637982217 
Productsingle-stranded nucleic acid binding R3H 
Protein accessionYP_589295 
Protein GI94967247 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.154539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.524488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATTG ACGACAAAGT TGCCGCAGCC AAGAAAGTCA GCGAACTTCT TAACACGGTG 
ATCCGCGAGG GGAACCTTCA CCTGAAGTAC CGCATCACCG TGGATCCGCC GCAGCCGCAC
AAGGAATTCA CGGCTCCGGA AATTCTCGTC GAGCTCTCGG GACCCGACAG CAGCCTGCTG
CTGGAGCGCA ACGCCGAACT GCTGCGCTCG CTTGAGTTTG TGTGCATCGA GATGCTGCGG
CTCGCTCCTG ACGAACACGA CCAGCTACAG TTCGACTCGA TGGGCTACCG CGCCACGCGC
CTCGACGAAC TAAAGATGGC CGCACAACAT GCTGCCGCCA AAGTTCGCGA CAGCGGCATG
CCGTATTCGT TCGCGCCGAT GTCGTCGCGC GAGCGCCGCA TTGTGCACAT CGCGCTGCGC
AGCGAAACCG ATCTACGCAC CGAAAGCGCG GGTGAAGCGG CGGGTCGGCA CGTGGTGCTG
TATCCCAAGG ACTACAAGGG AGCAGCGCCG GTGGAACGGC GACCTAGCTT TGGAAGACGG
GGAAGACGGT AG
 
Protein sequence
MPIDDKVAAA KKVSELLNTV IREGNLHLKY RITVDPPQPH KEFTAPEILV ELSGPDSSLL 
LERNAELLRS LEFVCIEMLR LAPDEHDQLQ FDSMGYRATR LDELKMAAQH AAAKVRDSGM
PYSFAPMSSR ERRIVHIALR SETDLRTESA GEAAGRHVVL YPKDYKGAAP VERRPSFGRR
GRR