| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0211 |
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| Symbol | |
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| ID | 4069680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 225488 |
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| End bp | 226195 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637982211 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_589290 |
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| Protein GI | 94967242 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.33248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTCG ACGGCAAAAC TGCGCTGGTC GCGGGCGGCA CCGGTGGCCT CGGAAAAGCG
GTTTCCCTCG CGTTAATGGC GGAAGGCGCG CGGGTGGTCG TCACCTACAT CATTCCCGAA
GAGTTCAACG CATTGCGCAC GGCGGCGGCT GATCGCCAGA TCGAAGGGCA CCACATTGAT
GTCACTGACG AAACGGCAAC GCAAAACCTC GTGGCGGACA TCATCGGCAA ATACGGCCGG
CTCGATTTCC TGATCAACAC TATCGGCGGC TATGCGGGCG GCATCAAGCT TTGGGAACTC
GAGACCAAGA CTTTCGAAAA GATGTTCACG CTGAACCTAC GCGCCGGTTA CTCTCTGGCA
CGCGCCGTGA TCCCCGCAAT GCTCAAACAG AAATCCGGAG CGATCGTGAA CATCGCGGCG
AAAGCAGCGG TTGACCATGC GGGCGGCGCT TCCGCTTACG CCAGTTCGAA GGCCGCGGCA
TTGGCGATGA TGGATTCGCT TGCCGAAGAT CTTCGCGGAA CCGGCGTGCG GGTGAACTCG
ATCCTGCCGA GCATCATTGA TACCGCAGCG AATCGGCACG CCATGCCGGG CGCCGACTAT
TCCAAGTGGC CGAAGCCGGA AGACATCGCA AAGGTCATCC TCTTCCTTTT GAGCGATGAC
GGCAAAGTCA TCCATGGCGC GGCAGTGCCG GTTTACGGGG CCTTGTAG
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| Protein sequence | MRFDGKTALV AGGTGGLGKA VSLALMAEGA RVVVTYIIPE EFNALRTAAA DRQIEGHHID
VTDETATQNL VADIIGKYGR LDFLINTIGG YAGGIKLWEL ETKTFEKMFT LNLRAGYSLA
RAVIPAMLKQ KSGAIVNIAA KAAVDHAGGA SAYASSKAAA LAMMDSLAED LRGTGVRVNS
ILPSIIDTAA NRHAMPGADY SKWPKPEDIA KVILFLLSDD GKVIHGAAVP VYGAL
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