Gene Acid345_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0180 
Symbol 
ID4073067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp191168 
End bp191890 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content58% 
IMG OID637982180 
Productcytochrome c biogenesis protein, transmembrane 
Protein accessionYP_589259 
Protein GI94967211 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00413997 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.473605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGTT TGCCCCTGCC GATCGCGGTC TTCCTCGCCG GACTTCTGTC CTTCCTCTCG 
CCCTGCGTTT TACCGCTGGT TCCGGGTTAC GTCTCTCTGA TTTCCGGCGC AAGTGTCGAA
GACCTACAGT CTGGTGACCG CAAGCTCAGC CGCACGGTCC TGCTGAACTC GATCATGTTC
ATCGTCGGCT TCAGTGTGGT GTTTATTGCC CTCGGCGCAG TGGCGACCGG CATCGGGCAG
TTCATGAATA TCTACCGCCG CCAACTCATG CAGGTGGCTG GCGTGGTAAT CATCATCTTC
GGCCTGCACC TCATCGGCGT GTTCAAGATC AAAGCTCTTC TCGCGGACAA GCGTCTTCAC
GACATGAAGG GCAGCGGCAC TGCAATCGGC GCATTCCTCA TTGGCTTCGC GTTCGCCTTC
GGCTGGACAC CTTGCATCGG CCCGATCCTC GCGGGCGTTC TCGCTATCGC CGGATCGCAA
GATACGGTTG TGAAGGGCGT GCTTCTTTTA GCGGTTTACT CCAGCGGACT CGCGGTGCCG
TTCCTGCTCA CGTCGCTGTT TGTCGGTGGT TTTCTGGCGT TCTATACCAA GTTCCGCCGG
CACCTGCATG CCGTAGAAGT TGTGAGTGGC GTTTTCCTGG TCGTGGTCGG CGCCCTGATT
CTTACGCGTC ACTTCACCAT CTTGTCGAGC TATCTTTCGT TCCTGAATCG GTTTTCGCTC
TGA
 
Protein sequence
MSSLPLPIAV FLAGLLSFLS PCVLPLVPGY VSLISGASVE DLQSGDRKLS RTVLLNSIMF 
IVGFSVVFIA LGAVATGIGQ FMNIYRRQLM QVAGVVIIIF GLHLIGVFKI KALLADKRLH
DMKGSGTAIG AFLIGFAFAF GWTPCIGPIL AGVLAIAGSQ DTVVKGVLLL AVYSSGLAVP
FLLTSLFVGG FLAFYTKFRR HLHAVEVVSG VFLVVVGALI LTRHFTILSS YLSFLNRFSL