Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0152 |
Symbol | |
ID | 4069737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 160542 |
End bp | 161363 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637982152 |
Product | TPR repeat-containing protein |
Protein accession | YP_589231 |
Protein GI | 94967183 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.072863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00176598 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAAGAA GCGCACGGGT ATTGGTCGTA GTCGCAGCCC TGCTAGCCAT GCTCGCGGGC ACAGGTTGCA ACAAGCTGAA AGCGCGCGAC CAACTCAATA AGGGCGTCCA GTCGTACAAG AACGCCAAGT ATGAAGAGGC GATCGAGCAT TTCAAGAACG CTGTCGAGCT TGACAACTCG CTGACCAACG CACGACTTTA CCTCGCGACG GCATATGCCC AGCAGTATGT TCCGGGTATG GATGCTCCTG AGAACGTCCG CAATGCCAAT ATGGCGATCG AGGAATTCAC CAAGATTCTC GATGCGAATC CGAGCCGCGA GCAGCAGATC CACAGCCTGA AAGGCATTGC TTCGCTCTAC TTCAACATGA AGAAGTTCGA CCAGGCTTCG GAGTATCACA AGAAGGTTAT CGCGCTCGAT CCGAACGATC CGGAGACCTA CTACTCCATC GCGGTGATCG ATTGGACGGA AGCGTACCAG GAAGATCAGA AGGCCCGGGC TGCCGCCGGC GTACAAGCCA CGGCTCAGCT GAAGGACAAA AAGGTCTGCC AGGAACTTCG CACGAAGAAT GCCCAGAAGG TTGAAGACGG CATTAACGCC CTTACGAAGG CCATCCAGCT TCGTCCGGAT TACGATGATG CCATGGCTTA CATCAACCTG CTCTACCGTC AGCGCGCCGA GTACGAATGT GACGACCAGG CCGCTTACGA TGCCGATATC AAGACGGCGA ACGAGTGGGT AGACAAGACG ATCGCGACCA AGAAGGCGAA GGCTGAAAAG GCCGGGCCGA CGGGCGTGAT CACCACCGAT CAATCGAAGT AA
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Protein sequence | MTRSARVLVV VAALLAMLAG TGCNKLKARD QLNKGVQSYK NAKYEEAIEH FKNAVELDNS LTNARLYLAT AYAQQYVPGM DAPENVRNAN MAIEEFTKIL DANPSREQQI HSLKGIASLY FNMKKFDQAS EYHKKVIALD PNDPETYYSI AVIDWTEAYQ EDQKARAAAG VQATAQLKDK KVCQELRTKN AQKVEDGINA LTKAIQLRPD YDDAMAYINL LYRQRAEYEC DDQAAYDADI KTANEWVDKT IATKKAKAEK AGPTGVITTD QSK
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