Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0117 |
Symbol | |
ID | 4071705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 125987 |
End bp | 126547 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637982117 |
Product | hypothetical protein |
Protein accession | YP_589196 |
Protein GI | 94967148 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.319114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATCA TCTCCGGGAA ATTTCGCAGC CGTTCGTTGA AGACGCCGCA AGGCATGGAC GTCCGCCCAT CCTCCGACCG CCTCCGCGAA ACGTTGTTCA ACGTCCTCGC CTCCGGCTAC CAACTCGAAG ACTCCCGCTG GATCGATTTA TTTGCCGGAA CTGGTGCTGT CGGACTGGAA GCTCTCAGCC GCGGTGCTGG ATACATCTAC TTTGTGGAGA AAGCGCCGAA GATCGCGCGC ATTACGCAGG AGAACGTGAA AAGTCTTGAT GCGCAAGATC AAGCCGAGGT TCTTACCAGC GATGCCAACG CAGGATTGCG CCAATTGGAG GGAATCGATC CGGTGGACTA TGTATTTCTC GATCCGCCGT ATCGCGAAGA GGGCGCGTAT CTCGGAGTGC TGCGAATTCT CAGCGACTCT CCGCTGCTCA AGCCAAGCGC GATCGTCATC GCCGAACACA CCAAGCACTT CGATCCCGGC GACGGCGTCG GTGCACTCCA GCGCTACCGC TCGCTGAAGC AGGGCGACGC CGTGCTGAGC TTCTATCGCC GAGCTACATA A
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Protein sequence | MRIISGKFRS RSLKTPQGMD VRPSSDRLRE TLFNVLASGY QLEDSRWIDL FAGTGAVGLE ALSRGAGYIY FVEKAPKIAR ITQENVKSLD AQDQAEVLTS DANAGLRQLE GIDPVDYVFL DPPYREEGAY LGVLRILSDS PLLKPSAIVI AEHTKHFDPG DGVGALQRYR SLKQGDAVLS FYRRAT
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