| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0077 |
|---|
| Symbol | |
|---|
| ID | 4068990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 79132 |
|---|
| End bp | 79584 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637982077 |
|---|
| Product | TonB-like protein |
|---|
| Protein accession | YP_589156 |
|---|
| Protein GI | 94967108 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTGTATGC ACTCAAAGAT GTCGCTTGCC CGACGGCGAT GCGAGGTGCA CAATTTGTGG
CCGCGAGGTT GCAACGTGCG GTTCTTCTTT TCCGCGCTCC TGGTTATTGG CATGGCGCAG
GGCTTAGGTG CTCAGCCACC GCAGGATATC CCACATTGTC CCTTCAAAGC CCCGCGTGAC
GACTGCGCGA CAGTCCCAAA AGCGACTTTC ACGCCGCAAC CGAATTTCTC GGATTACGCG
CGGAAGAAGC GGCTCGAGGG AAACGTGATC TTATCGCTCA CCGTGCTGTC GGATGGTACG
GTTGACGATG TGAAGGTGAC GCGCAGCCTG GAGAAGAGCC TTGATGAGCA GGCAATAAAA
ACGGTCCGAA CCTGGAAGTT CGAACCGTCT ATGTACCAGG GAAAGCCAAT TTCGTACTCG
ACCGCGGTGG AAGTGAACTT TCGTCTTTAC TGA
|
|---|
| Protein sequence | MCMHSKMSLA RRRCEVHNLW PRGCNVRFFF SALLVIGMAQ GLGAQPPQDI PHCPFKAPRD
DCATVPKATF TPQPNFSDYA RKKRLEGNVI LSLTVLSDGT VDDVKVTRSL EKSLDEQAIK
TVRTWKFEPS MYQGKPISYS TAVEVNFRLY
|
|---|
| |